Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0322
         (354 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD2383...   231   1e-61
AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA ...   231   1e-61
AY113215-1|AAM29220.1|  268|Drosophila melanogaster AT07410p pro...    29   1.7  
AE014134-2650|AAN10920.1|  312|Drosophila melanogaster CG31735-P...    27   6.9  
AE014134-2649|AAN10919.2|  362|Drosophila melanogaster CG31735-P...    27   6.9  

>AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD23830
           protein.
          Length = 652

 Score =  231 bits (566), Expect = 1e-61
 Identities = 107/117 (91%), Positives = 111/117 (94%)
 Frame = +2

Query: 2   NFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSR 181
           NFKKI VVP AKDFIDI+LSKTQRKTPTVVHK YKISRIR FY RKVKYTQQNFHDRLS+
Sbjct: 5   NFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHDRLSQ 64

Query: 182 IIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 352
           IIQ+FPKLDDVHPFYADLMNVLYDKDHYKL LGQLNTARHL+DNVAKDYVRLLKYGD
Sbjct: 65  IIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYGD 121


>AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA
           protein.
          Length = 652

 Score =  231 bits (566), Expect = 1e-61
 Identities = 107/117 (91%), Positives = 111/117 (94%)
 Frame = +2

Query: 2   NFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSR 181
           NFKKI VVP AKDFIDI+LSKTQRKTPTVVHK YKISRIR FY RKVKYTQQNFHDRLS+
Sbjct: 5   NFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHDRLSQ 64

Query: 182 IIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 352
           IIQ+FPKLDDVHPFYADLMNVLYDKDHYKL LGQLNTARHL+DNVAKDYVRLLKYGD
Sbjct: 65  IIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYGD 121


>AY113215-1|AAM29220.1|  268|Drosophila melanogaster AT07410p
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 235 EISIKWMDII*LWEFLNNSGQSVVEVLLGIFHFSNIKPTYS*YF-IMLVNDC 83
           +I+ K+ D++  + + N+  +S+V   LG+F   ++K TYS Y   +L N+C
Sbjct: 23  DINSKYYDMVIEFMWSNSFLKSLVYESLGLFDLPDMKQTYSWYVRHILRNEC 74


>AE014134-2650|AAN10920.1|  312|Drosophila melanogaster CG31735-PA,
           isoform A protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = +2

Query: 50  IILSKTQRKTPTVVHKHYKISRI------RGFYIRKVKYTQQNFH 166
           I+  K +R+   ++H+H+  + I      RG+++RK  +  +N H
Sbjct: 43  ILYEKVERRLQGIIHEHFHRAAIRIQALFRGWWVRKFIHDVRNLH 87


>AE014134-2649|AAN10919.2|  362|Drosophila melanogaster CG31735-PB,
           isoform B protein.
          Length = 362

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
 Frame = +2

Query: 50  IILSKTQRKTPTVVHKHYKISRI------RGFYIRKVKYTQQNFH 166
           I+  K +R+   ++H+H+  + I      RG+++RK  +  +N H
Sbjct: 93  ILYEKVERRLQGIIHEHFHRAAIRIQALFRGWWVRKFIHDVRNLH 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,431,122
Number of Sequences: 53049
Number of extensions: 299939
Number of successful extensions: 546
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)