Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0322
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   9.9  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   9.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   9.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 224 KMDGHHLTLGIPE 186
           K D HH  + IPE
Sbjct: 523 KYDSHHKLIEIPE 535


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 224 KMDGHHLTLGIPE 186
           K D HH  + IPE
Sbjct: 523 KYDSHHKLIEIPE 535


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 93  TSIIKYQEYVGFILEK*NI 149
           TS ++Y  Y+G +    NI
Sbjct: 165 TSAVRYTHYIGTLATNDNI 183


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 187  NNSGQSVVEVLLG 149
            N +GQ  V+VLLG
Sbjct: 1501 NEAGQKEVKVLLG 1513


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 137 KVKYTQQNFHDR 172
           +V YT +NFH R
Sbjct: 144 QVPYTVKNFHPR 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,357
Number of Sequences: 438
Number of extensions: 1986
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)