Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0321
(410 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 3e-57
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 215 9e-57
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 214 3e-56
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 162 9e-41
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 96 9e-21
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 3e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.37
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 1.1
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.1
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 1.5
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 1.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 2.0
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 3.4
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 3.4
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 27 6.0
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14) 27 7.9
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043) 27 7.9
SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39) 27 7.9
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5) 27 7.9
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 217 bits (530), Expect = 3e-57
Identities = 98/118 (83%), Positives = 107/118 (90%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EE
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEE 118
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 215 bits (526), Expect = 9e-57
Identities = 97/118 (82%), Positives = 106/118 (89%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
MNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEE 118
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 214 bits (522), Expect = 3e-56
Identities = 96/118 (81%), Positives = 108/118 (91%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEE 118
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 162 bits (394), Expect = 9e-41
Identities = 76/113 (67%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 250
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 251 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEE 816
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 96.3 bits (229), Expect = 9e-21
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEXKTFFPEE 409
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEE 148
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 229
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEXKTFFPEE 409
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQ 175
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 125 GKVEIIANDQGNRTTPSYVAFTDTERLI 208
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.37
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 134 EIIANDQGNRTTPSYVAFT-DTERL 205
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 142 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 312
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 242 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 144
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 1.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 260 RILCCWGSSPPGSWRH 213
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 1.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 260 RILCCWGSSPPGSWRH 213
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 2 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 88
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 187 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 327
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 324 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 178
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 187 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH 315
H R +R+ + GG +EP + R T T C+CA R+
Sbjct: 1181 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDAETCFCAKRY 1226
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 218 AKNQVAMNPNNTIFDAKRLIGRKFEDATVQAD 313
AKNQ+ NP N + + L FED+ ++ D
Sbjct: 429 AKNQIGQNPTNHAKNQRYLKSIVFEDSLIRND 460
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 158 CPGRWR*SPPSRAGRHQRKSTWY 90
C GRW S AG ++KS WY
Sbjct: 3726 CVGRWWKEIKSLAGVSEKKSRWY 3748
>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
Length = 1624
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 187 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH 315
H R +R+ + GG DEP + R T T C+CA ++
Sbjct: 705 HGERHGYRKLSRVCGGRRPDEPYERTARVHTILSTYAGACFCAKQY 750
>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
Length = 801
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 133 HLPVLEDTNARVRGTQIDSYCGCFCHFVF 47
+LP +E +NAR G ++ +Y + FVF
Sbjct: 293 NLPGIEKSNARTMGNRLQAYQSSYQVFVF 321
>SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39)
Length = 2865
Score = 26.6 bits (56), Expect = 7.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 266 WHRILCCWGSSPPGSW 219
WH + W SS GSW
Sbjct: 511 WHHVCATWNSSALGSW 526
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 190 RHRASHRRCRQEPGGDEPQQHNI-RCQTSHR 279
R RASHR C + P P++H + R + +H+
Sbjct: 808 RGRASHRACARAPKMPPPERHALTRLRHTHQ 838
>SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5)
Length = 572
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 160 QDHSVLCCVHRHR-ASHRRCRQEPGGDEPQQHNIRCQTSHR 279
++H+ C HR R ++ GG EPQ CQ H+
Sbjct: 340 REHANTTCFENHRRVKPRGTKKRGGGGEPQVSWSYCQRYHK 380
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,174,787
Number of Sequences: 59808
Number of extensions: 313598
Number of successful extensions: 940
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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