Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0321
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   1.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   5.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   7.6  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       22   7.6  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 55   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 156
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 105  QEYVVPRSIPTAGAFA 58
            Q+Y  PR++ +AG FA
Sbjct: 1244 QDYAPPRALMSAGGFA 1259


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 205 ETLGVCERNIRRSGPVALVVGDDLHLPVLEDTNARVRGTQIDSYCGCFCH 56
           + LG  E+   RS PVA  V  ++      D ++ V G+ +    G F H
Sbjct: 72  QALGQLEK--ARSKPVAFAVRTNVSYDGSLDDDSPVHGSAVSFEVGDFLH 119


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 175 LCCVHRHRASHRRCRQEPGGDEP 243
           +CC+   R   RR    P  D+P
Sbjct: 322 VCCIESFRRRRRRDAFTPSKDDP 344


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,483
Number of Sequences: 2352
Number of extensions: 9836
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)