Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0321
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 213 6e-56
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 213 6e-56
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 184 2e-47
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 184 2e-47
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 181 2e-46
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 167 2e-42
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 167 2e-42
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 167 4e-42
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 99 1e-21
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 99 1e-21
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 99 1e-21
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 99 1e-21
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 84 4e-17
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 79 9e-16
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 5.3
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 5.3
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 7.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 7.0
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 7.0
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 7.0
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 26 9.2
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 26 9.2
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 26 9.2
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 26 9.2
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 26 9.2
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 26 9.2
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 26 9.2
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 213 bits (519), Expect = 6e-56
Identities = 98/119 (82%), Positives = 108/119 (90%), Gaps = 1/119 (0%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEXKTFFPEE 409
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE K F PEE
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEE 119
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 213 bits (519), Expect = 6e-56
Identities = 98/119 (82%), Positives = 108/119 (90%), Gaps = 1/119 (0%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEXKTFFPEE 409
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE K F PEE
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEE 119
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 184 bits (449), Expect = 2e-47
Identities = 81/118 (68%), Positives = 99/118 (83%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEE 118
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 184 bits (449), Expect = 2e-47
Identities = 81/118 (68%), Positives = 99/118 (83%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEE 118
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 181 bits (440), Expect = 2e-46
Identities = 79/118 (66%), Positives = 98/118 (83%)
Frame = +2
Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 236 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEE 118
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 167 bits (407), Expect = 2e-42
Identities = 76/114 (66%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 247
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 248 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V + K F PEE
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEE 149
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 167 bits (407), Expect = 2e-42
Identities = 76/114 (66%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 247
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 248 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V + K F PEE
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEE 149
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 167 bits (405), Expect = 4e-42
Identities = 77/114 (67%), Positives = 91/114 (79%), Gaps = 2/114 (1%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 247
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 248 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEXKTFFPEE 409
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEE
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEE 146
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 99.1 bits (236), Expect = 1e-21
Identities = 49/107 (45%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +2
Query: 71 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 247
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 248 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGE 385
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNE 106
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 99.1 bits (236), Expect = 1e-21
Identities = 49/107 (45%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +2
Query: 71 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 247
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 248 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGE 385
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNE 106
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 99.1 bits (236), Expect = 1e-21
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 238
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 239 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 340
N NT+F KRLIGR++ED VQ D+K P+++V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 99.1 bits (236), Expect = 1e-21
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 238
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 239 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 340
N NT+F KRLIGR++ED VQ D+K P+++V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 83.8 bits (198), Expect = 4e-17
Identities = 51/129 (39%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +2
Query: 47 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIG 211
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 212 DAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKG 382
A Q NP TI+DAKR IGR FE + +D K +PF++ D GK ++
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144
Query: 383 EXKTFFPEE 409
K +PEE
Sbjct: 145 GTKNVYPEE 153
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 79.4 bits (187), Expect = 9e-16
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 253
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 254 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEXKTFFPEE 409
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQ 116
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +2
Query: 71 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 247
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 248 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK 379
L+G+ + + + + F V D K + +K
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFK 129
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 163 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 258
D V+CCVH R S+ + Q+ D+ Q N+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54
>U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical
protein C33H5.10 protein.
Length = 348
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = +1
Query: 43 LKIQNGKST--RSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRC 216
L IQ S R R +S H L P GG + G + S H H +
Sbjct: 241 LYIQKASSMDRRERTKSKQHPLSIMDAPKDRGGRTEEMVGVKQESFRQQQHTFDRQHSQN 300
Query: 217 RQEPGGDEPQQHNIRCQTSH 276
RQ+ D P+ H + H
Sbjct: 301 RQKSTFDRPKTHEEQVLEQH 320
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 162 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 58
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 364 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 254
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 26.6 bits (56), Expect = 7.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 136 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 222
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 26.6 bits (56), Expect = 7.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 136 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 222
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 208 RRCRQEPGGDEPQQHNIRCQTS 273
R + P GDEP+QH I +T+
Sbjct: 4602 REVYESPEGDEPEQHYIETKTT 4623
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 208 RRCRQEPGGDEPQQHNIRCQTS 273
R + P GDEP+QH I +T+
Sbjct: 4602 REVYESPEGDEPEQHYIETKTT 4623
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 116 RHQRKSTWYPDRFLLR 69
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 131 PSRAGRHQRKSTWYPDRFLLRVLL 60
PSR RH S W+ R LL L+
Sbjct: 87 PSRVARHLAHSNWWKQRRLLHPLI 110
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 118 EDTNARVRGTQIDSYCGC 65
ED N+R +++SYCGC
Sbjct: 21 EDLNSRRYRQELESYCGC 38
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 181
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 98 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 181
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 286 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 131 PSRAGRHQRKSTWYPDRFLLRVLL 60
PSR RH S W+ R LL L+
Sbjct: 87 PSRVARHLAHSNWWKQRRLLHPLI 110
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 62 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 181
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 286 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 26.2 bits (55), Expect = 9.2
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +1
Query: 43 LKIQNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHR 192
LK NGK T+SRN+ V RE D Q+P Q D +L V R
Sbjct: 176 LKETNGKVTKSRNQLSERVSELEAQLKRE-ADTAQKPKQADPDLLNKVGR 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,098,655
Number of Sequences: 27780
Number of extensions: 217226
Number of successful extensions: 658
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -