Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0319
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 49 1e-06
12_02_0902 + 24176326-24176706,24176785-24177017,24177121-241772... 49 2e-06
01_01_0937 - 7388230-7388283,7388957-7389091,7389201-7389365,738... 45 3e-05
12_01_1112 - 11866376-11866447,11866528-11866662,11866772-118669... 44 7e-05
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 43 9e-05
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 36 0.013
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 36 0.013
04_04_0807 - 28192320-28192494,28192611-28192759,28192882-281929... 35 0.023
03_02_0103 + 5640652-5641029,5641458-5641693,5642292-5642367,564... 35 0.023
05_05_0322 + 24094831-24094992,24095147-24095216,24096184-240963... 35 0.031
05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826... 35 0.031
09_03_0160 - 12915283-12915453,12915546-12915713,12915944-129159... 32 0.22
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 30 0.66
05_05_0017 + 21546434-21546841 29 1.1
06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711... 29 1.5
01_01_0812 + 6318453-6318726,6318826-6319041,6319147-6319665,632... 29 1.5
12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,270... 29 2.0
08_02_0698 - 20151374-20151526,20153024-20153110,20153327-20153701 29 2.0
07_03_1558 - 27722852-27722963,27723191-27723240,27723338-277234... 29 2.0
09_04_0214 + 15711576-15711891,15712615-15713903,15714410-157151... 28 3.5
07_03_1528 + 27474973-27475289,27476890-27477073,27477081-274772... 27 4.6
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 27 6.1
01_01_1046 - 8246740-8247504 27 6.1
10_08_0809 - 20725858-20725950,20726375-20726545,20726895-207271... 27 8.1
09_02_0361 - 7848477-7848601,7849498-7849900 27 8.1
04_03_0865 + 20402711-20404057 27 8.1
03_03_0046 + 14040331-14040801,14040915-14041050,14041159-140412... 27 8.1
02_04_0607 - 24302582-24303075,24303150-24304197 27 8.1
02_02_0401 + 9847398-9847463,9848916-9849019,9849873-9849876,984... 27 8.1
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = +1
Query: 265 ANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
A+Y TVQ ++T +MR ++ +W++EV E+ + L +S++DRFLS
Sbjct: 124 ADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLS 172
>12_02_0902 +
24176326-24176706,24176785-24177017,24177121-24177273,
24177392-24177425,24177536-24177685,24177772-24177906,
24177994-24178065
Length = 385
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E R A+Y VQ ++T +MR ++ +W++EV ++ + LA+S+LDR+LS
Sbjct: 129 EARRQSAADYIEAVQVDVTANMRAILVDWLVEVADEYKLVADTLYLAVSYLDRYLS 184
>01_01_0937 -
7388230-7388283,7388957-7389091,7389201-7389365,
7389436-7389516,7389692-7389767,7389855-7389988,
7390082-7390174,7390885-7391018,7391125-7391533,
7392381-7392593
Length = 497
Score = 44.8 bits (101), Expect = 3e-05
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E R + ++ T+Q ++ P MR ++ +W++EV E+ + L ++++DR+LS
Sbjct: 252 ETRKRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLS 307
>12_01_1112 -
11866376-11866447,11866528-11866662,11866772-11866921,
11867263-11867338,11867426-11867559,11867655-11867747,
11868456-11868589,11868696-11868744,11869271-11869441,
11870291-11870452
Length = 391
Score = 43.6 bits (98), Expect = 7e-05
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E R + ++ T+Q ++ P MR ++ +W++EV E+ + L ++++DR+LS
Sbjct: 172 ETRKHPSTDFMETLQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLS 227
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 43.2 bits (97), Expect = 9e-05
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +1
Query: 262 TANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
+ ++ T+Q ++ P MR ++ +W++EV E+ + L ++++DR+LS
Sbjct: 260 STDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLS 309
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 268 NYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
+Y T Q EI MR ++A+W++EV E L++ +DR+LSM
Sbjct: 211 DYIDT-QVEINSKMRAILADWIIEVHHKFELMPETLYLSMYVIDRYLSM 258
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 241 TEERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
TE Y Y + QTEI MR ++ +W++EV E L + +D++LS+
Sbjct: 174 TENTYRPLCTYMVS-QTEINERMRAILTDWLIEVHYRLMLMPETLYLTVYIIDQYLSL 230
>04_04_0807 -
28192320-28192494,28192611-28192759,28192882-28192980,
28193212-28193433,28193522-28193611,28193837-28193959,
28194040-28194199,28194288-28194347,28194484-28194574,
28194667-28194730
Length = 410
Score = 35.1 bits (77), Expect = 0.023
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
EE V +Y + Q +I MR ++ +W++EV +E L ++ +DRFL
Sbjct: 166 EEMSCVQPDYMSS-QGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFL 219
>03_02_0103 +
5640652-5641029,5641458-5641693,5642292-5642367,
5642450-5642526,5642672-5642702,5642798-5642950,
5643259-5643300,5643372-5643440,5643645-5643752
Length = 389
Score = 35.1 bits (77), Expect = 0.023
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 NYFGTVQTEI-TPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
NY +Q I +R ++ +WM +V QEE A+S++DRFLS A
Sbjct: 136 NYVQEIQGGIINMDVRGILVDWMADVAYVFNLQEETLHHAVSYVDRFLSKIA 187
>05_05_0322 +
24094831-24094992,24095147-24095216,24096184-24096307,
24096403-24096502,24096598-24096825,24096916-24097041,
24097092-24097376,24097490-24097648,24097751-24097929,
24098078-24098210
Length = 521
Score = 34.7 bits (76), Expect = 0.031
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E+ P MR ++A+W+++V E L + +DR+LS+
Sbjct: 294 QVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSL 336
>05_03_0084 +
8266564-8266699,8267497-8267685,8267772-8267911,
8268130-8268225,8268327-8268388,8268559-8268634,
8268709-8268785,8268866-8268899,8268983-8269132,
8269222-8269356,8269450-8269533
Length = 392
Score = 34.7 bits (76), Expect = 0.031
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 262 TANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDR 402
+ ++ T+Q I MR ++ +W++EV E+ E L ++++DR
Sbjct: 162 STDFVETIQKNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDR 208
>09_03_0160 -
12915283-12915453,12915546-12915713,12915944-12915957,
12916051-12916153,12917359-12917445,12917741-12918013
Length = 271
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTE-ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
E Y+ ++Y +++ I P R W+L+V E G LA++++DRFLS+
Sbjct: 59 EAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSL 116
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 30.3 bits (65), Expect = 0.66
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 304 HMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
+MR + WM E+ + + LA+S++DRFLS
Sbjct: 167 NMRGKLVNWMEELVYGFNLWDNILYLAVSYVDRFLS 202
>05_05_0017 + 21546434-21546841
Length = 135
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 257 PSPLTTSALCRPRSHLTCAVSSPSG 331
P+PL+T LCRP + SSP+G
Sbjct: 58 PAPLSTPELCRPGEPVPAPSSSPAG 82
>06_01_0922 -
7113781-7113942,7114093-7114235,7115305-7115506,
7115590-7115685,7117053-7117139,7117237-7117638
Length = 363
Score = 29.1 bits (62), Expect = 1.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 328 WMLEVCEDRGCQEEVFXLAISFLDRFLS 411
W+L+V G Q LA+S++DRF+S
Sbjct: 131 WILKVRSVHGFQPATAYLAVSYMDRFMS 158
>01_01_0812 +
6318453-6318726,6318826-6319041,6319147-6319665,
6320853-6321064
Length = 406
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 75 KSYPSRRVRDRSDKHGAVVRGTRQPRQWRGRTAAAASCC 191
+SYP R+ +D +GA + + P+Q+ R A +CC
Sbjct: 310 RSYPEARIM-YADYYGAAMSFAQNPKQFGFRHGALRTCC 347
>12_01_0356 -
2707820-2708395,2708475-2708705,2709071-2709190,
2709281-2709401,2711588-2712027
Length = 495
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 9 NTTCNTPALAPDRSAVEHSAQN--KSYPSRRVRDRSDKHGAVVRGTR-QPRQWRGRTAAA 179
+T+C+ PALA +A +A N + SR + R + G V GTR P + + A+
Sbjct: 421 STSCSQPALAAAAAAPRATAMNLLQGKGSRSLNSRRTRKGKVQFGTRAAPASEKSKGASI 480
Query: 180 AS 185
S
Sbjct: 481 VS 482
>08_02_0698 - 20151374-20151526,20153024-20153110,20153327-20153701
Length = 204
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 328 WMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
W+L+V E G LA+S++DRFLS+
Sbjct: 122 WILKVRELYGMLPVTAYLAVSYMDRFLSL 150
>07_03_1558 -
27722852-27722963,27723191-27723240,27723338-27723406,
27723507-27723571,27724058-27724145,27724294-27724362
Length = 150
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 108 NGHVRVAKDMICSARSARQLIGRERAP 28
NGH+ V K +IC+ S L E+ P
Sbjct: 93 NGHIEVIKALICAGASVSALNSHEKTP 119
>09_04_0214 + 15711576-15711891,15712615-15713903,15714410-15715117,
15715369-15715908
Length = 950
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 9 NTTCNTPALAPDRSAVEHSAQNKSYPSRRVRDRSD 113
NTT +TP PD +E+ S R DR D
Sbjct: 897 NTTADTPWSTPDHHIIENVDSGSDVESVREEDRED 931
>07_03_1528 +
27474973-27475289,27476890-27477073,27477081-27477261,
27477270-27478206,27478384-27479035,27479352-27479798
Length = 905
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEV 372
ITP +R+LVAE + + DR ++E+
Sbjct: 626 ITPELRKLVAEILRNLAIDRDARQEI 651
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 123 AVVRGTRQPRQWRGRTAA 176
AV+R R+PR+WRG AA
Sbjct: 22 AVLRWLRRPRRWRGSGAA 39
>01_01_1046 - 8246740-8247504
Length = 254
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 139 VPRTTAPCLSERSRTRREGYDLFCAECSTADRS 41
+PR A C++ + T R D FC C + R+
Sbjct: 93 LPRGVAACMAAQDYTSRLPRDAFCLPCGASFRA 125
>10_08_0809 -
20725858-20725950,20726375-20726545,20726895-20727101,
20727208-20727879
Length = 380
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 181 AAAAVRPRHCRG*RVPRTTAPCLSERSRTRR 89
AAA+VRPR CR + + ++ER R +R
Sbjct: 177 AAASVRPRSCRPPQPGAPSKNLMAERRRRKR 207
>09_02_0361 - 7848477-7848601,7849498-7849900
Length = 175
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 313 RLVAEWMLEVCEDRGCQEE 369
R AEW+++ EDR CQ +
Sbjct: 118 REAAEWVVDTTEDRACQAQ 136
>04_03_0865 + 20402711-20404057
Length = 448
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -1
Query: 373 RLLLGSRDLRIPLASTRRR--DGACEV 299
RLLLG R++R+P R R GA EV
Sbjct: 352 RLLLGGREVRVPAVFVRGRHVGGAAEV 378
>03_03_0046 +
14040331-14040801,14040915-14041050,14041159-14041295,
14041366-14041965
Length = 447
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PRQWRGRTAAAASCC 191
PRQWR A+A CC
Sbjct: 3 PRQWRPMLASATKCC 17
>02_04_0607 - 24302582-24303075,24303150-24304197
Length = 513
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 159 ATAGADAFRAQQLHVYPNGHVRV 91
AT+G R QQLH + +GHV V
Sbjct: 68 ATSGRAGLRFQQLHHHHHGHVDV 90
>02_02_0401 +
9847398-9847463,9848916-9849019,9849873-9849876,
9849968-9851230
Length = 478
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 121 ELLCAERVSPGSGEGAPRL 177
EL+C ER P SGE + R+
Sbjct: 332 ELICTERPDPDSGEASQRI 350
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,795,613
Number of Sequences: 37544
Number of extensions: 190381
Number of successful extensions: 730
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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