Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0319
(421 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41808-1|AAC47016.1| 452|Drosophila melanogaster Cyclin D protein. 70 1e-12
AY069509-1|AAL39654.1| 481|Drosophila melanogaster LD22957p pro... 70 1e-12
AF260583-1|AAG13285.1| 481|Drosophila melanogaster cyclin D pro... 70 1e-12
AE014298-2283|AAF48537.1| 481|Drosophila melanogaster CG9096-PC... 70 1e-12
AE014298-2282|AAN09375.1| 481|Drosophila melanogaster CG9096-PB... 70 1e-12
AE014298-2281|AAN09374.1| 481|Drosophila melanogaster CG9096-PA... 70 1e-12
X75026-1|CAA52934.1| 601|Drosophila melanogaster Drosophila cyc... 43 1e-04
AY069507-1|AAL39652.1| 709|Drosophila melanogaster LD22682p pro... 43 1e-04
AY061233-1|AAL28781.1| 410|Drosophila melanogaster LD17578p pro... 43 1e-04
AE014134-2628|AAF53479.1| 602|Drosophila melanogaster CG3938-PB... 43 1e-04
AE014134-2627|AAN10908.1| 709|Drosophila melanogaster CG3938-PE... 43 1e-04
AE014134-2626|AAN10907.1| 709|Drosophila melanogaster CG3938-PD... 43 1e-04
AE014134-2625|AAF53478.1| 709|Drosophila melanogaster CG3938-PC... 43 1e-04
AE014134-2624|AAF53477.1| 709|Drosophila melanogaster CG3938-PA... 43 1e-04
M24841-1|AAA28435.1| 491|Drosophila melanogaster protein ( D.me... 41 8e-04
D10858-1|BAA01629.1| 491|Drosophila melanogaster cyclin A protein. 41 8e-04
D10857-1|BAA01628.1| 491|Drosophila melanogaster cyclin A protein. 41 8e-04
BT001635-1|AAN71390.1| 345|Drosophila melanogaster RE38818p pro... 41 8e-04
AY058712-1|AAL13941.1| 491|Drosophila melanogaster LD44443p pro... 41 8e-04
AE014296-2048|AAF50000.3| 345|Drosophila melanogaster CG5940-PB... 41 8e-04
AE014296-2047|AAF49999.2| 491|Drosophila melanogaster CG5940-PA... 41 8e-04
X55542-1|CAA39148.1| 530|Drosophila melanogaster cyclin B protein. 32 0.36
M33192-1|AAA28436.1| 530|Drosophila melanogaster protein ( D.me... 32 0.36
AY102682-1|AAM27511.1| 530|Drosophila melanogaster LD23613p pro... 32 0.36
AJ006773-3|CAA07240.1| 500|Drosophila melanogaster cyclin B, ty... 32 0.36
AJ006773-2|CAA07239.1| 524|Drosophila melanogaster cyclin B, ty... 32 0.36
AJ006773-1|CAA07238.1| 530|Drosophila melanogaster cyclin B, ty... 32 0.36
AE013599-3472|AAM71124.1| 500|Drosophila melanogaster CG3510-PC... 32 0.36
AE013599-3471|AAG22197.1| 524|Drosophila melanogaster CG3510-PB... 32 0.36
AE013599-3470|AAM71123.1| 530|Drosophila melanogaster CG3510-PD... 32 0.36
AE013599-3469|AAF46904.1| 530|Drosophila melanogaster CG3510-PA... 32 0.36
BT001747-1|AAN71502.1| 421|Drosophila melanogaster RE74585p pro... 28 5.8
AY069133-1|AAL39278.1| 315|Drosophila melanogaster GH14260p pro... 28 5.8
AE014297-123|AAN13285.1| 421|Drosophila melanogaster CG9775-PC,... 28 5.8
AE014297-122|AAF52112.1| 421|Drosophila melanogaster CG9775-PA,... 28 5.8
>U41808-1|AAC47016.1| 452|Drosophila melanogaster Cyclin D protein.
Length = 452
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E+ + + YF ++Q +ITP MR++VAEWM+EVC + CQEEV LA++++DRFLS
Sbjct: 136 EKHHKIPDTYF-SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS 190
>AY069509-1|AAL39654.1| 481|Drosophila melanogaster LD22957p
protein.
Length = 481
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E+ + + YF ++Q +ITP MR++VAEWM+EVC + CQEEV LA++++DRFLS
Sbjct: 165 EKHHKIPDTYF-SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS 219
>AF260583-1|AAG13285.1| 481|Drosophila melanogaster cyclin D
protein.
Length = 481
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E+ + + YF ++Q +ITP MR++VAEWM+EVC + CQEEV LA++++DRFLS
Sbjct: 165 EKHHKIPDTYF-SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS 219
>AE014298-2283|AAF48537.1| 481|Drosophila melanogaster CG9096-PC,
isoform C protein.
Length = 481
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E+ + + YF ++Q +ITP MR++VAEWM+EVC + CQEEV LA++++DRFLS
Sbjct: 165 EKHHKIPDTYF-SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS 219
>AE014298-2282|AAN09375.1| 481|Drosophila melanogaster CG9096-PB,
isoform B protein.
Length = 481
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E+ + + YF ++Q +ITP MR++VAEWM+EVC + CQEEV LA++++DRFLS
Sbjct: 165 EKHHKIPDTYF-SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS 219
>AE014298-2281|AAN09374.1| 481|Drosophila melanogaster CG9096-PA,
isoform A protein.
Length = 481
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLS 411
E+ + + YF ++Q +ITP MR++VAEWM+EVC + CQEEV LA++++DRFLS
Sbjct: 165 EKHHKIPDTYF-SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS 219
>X75026-1|CAA52934.1| 601|Drosophila melanogaster Drosophila cyclin
E type I protein.
Length = 601
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 250 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 287
>AY069507-1|AAL39652.1| 709|Drosophila melanogaster LD22682p
protein.
Length = 709
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 357 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 394
>AY061233-1|AAL28781.1| 410|Drosophila melanogaster LD17578p
protein.
Length = 410
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 58 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 95
>AE014134-2628|AAF53479.1| 602|Drosophila melanogaster CG3938-PB,
isoform B protein.
Length = 602
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 250 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 287
>AE014134-2627|AAN10908.1| 709|Drosophila melanogaster CG3938-PE,
isoform E protein.
Length = 709
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 357 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 394
>AE014134-2626|AAN10907.1| 709|Drosophila melanogaster CG3938-PD,
isoform D protein.
Length = 709
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 357 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 394
>AE014134-2625|AAF53478.1| 709|Drosophila melanogaster CG3938-PC,
isoform C protein.
Length = 709
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 357 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 394
>AE014134-2624|AAF53477.1| 709|Drosophila melanogaster CG3938-PA,
isoform A protein.
Length = 709
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 295 ITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
+ P MR ++ +W++EVCE E F LA+ +LDR+L
Sbjct: 357 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYL 394
>M24841-1|AAA28435.1| 491|Drosophila melanogaster protein (
D.melanogaster cyclinA mRNA, complete cds. ).
Length = 491
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 228 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 272
>D10858-1|BAA01629.1| 491|Drosophila melanogaster cyclin A protein.
Length = 491
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 228 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 272
>D10857-1|BAA01628.1| 491|Drosophila melanogaster cyclin A protein.
Length = 491
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 228 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 272
>BT001635-1|AAN71390.1| 345|Drosophila melanogaster RE38818p
protein.
Length = 345
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 82 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 126
>AY058712-1|AAL13941.1| 491|Drosophila melanogaster LD44443p
protein.
Length = 491
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 228 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 272
>AE014296-2048|AAF50000.3| 345|Drosophila melanogaster CG5940-PB,
isoform B protein.
Length = 345
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 82 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 126
>AE014296-2047|AAF49999.2| 491|Drosophila melanogaster CG5940-PA,
isoform A protein.
Length = 491
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSMCA 420
Q +I+ +MR ++ +W++EV E+ E L++ +LDRFLS A
Sbjct: 228 QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMA 272
>X55542-1|CAA39148.1| 530|Drosophila melanogaster cyclin B protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 324
>M33192-1|AAA28436.1| 530|Drosophila melanogaster protein (
D.melanogaster cyclinB mRNA, complete cds. ).
Length = 530
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 324
>AY102682-1|AAM27511.1| 530|Drosophila melanogaster LD23613p
protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 324
>AJ006773-3|CAA07240.1| 500|Drosophila melanogaster cyclin B, type
III protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 252 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 294
>AJ006773-2|CAA07239.1| 524|Drosophila melanogaster cyclin B, type
II protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 276 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 318
>AJ006773-1|CAA07238.1| 530|Drosophila melanogaster cyclin B, type
I protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 324
>AE013599-3472|AAM71124.1| 500|Drosophila melanogaster CG3510-PC,
isoform C protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 252 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 294
>AE013599-3471|AAG22197.1| 524|Drosophila melanogaster CG3510-PB,
isoform B protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 276 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 318
>AE013599-3470|AAM71123.1| 530|Drosophila melanogaster CG3510-PD,
isoform D protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 324
>AE013599-3469|AAF46904.1| 530|Drosophila melanogaster CG3510-PA,
isoform A protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 QTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
Q E++ MR ++ +W+ EV E F LA++ +DR+L +
Sbjct: 282 QKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQV 324
>BT001747-1|AAN71502.1| 421|Drosophila melanogaster RE74585p
protein.
Length = 421
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +3
Query: 48 SAVEHSAQNKSYPSRRVRDRSDKHG-------AVVRGTRQPRQWRGRTAAAA 182
+A A N S +RR R R+ A V+G PRQ RGR+A AA
Sbjct: 296 AASSSGAVNNSASARRSRSRNRAAAVAAAAIAATVQGRANPRQRRGRSAGAA 347
>AY069133-1|AAL39278.1| 315|Drosophila melanogaster GH14260p
protein.
Length = 315
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +3
Query: 48 SAVEHSAQNKSYPSRRVRDRSDKHG-------AVVRGTRQPRQWRGRTAAAA 182
+A A N S +RR R R+ A V+G PRQ RGR+A AA
Sbjct: 186 AASSSGAVNNSASARRSRSRNRAAAVAAAAIAATVQGRANPRQRRGRSAGAA 237
>AE014297-123|AAN13285.1| 421|Drosophila melanogaster CG9775-PC,
isoform C protein.
Length = 421
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +3
Query: 48 SAVEHSAQNKSYPSRRVRDRSDKHG-------AVVRGTRQPRQWRGRTAAAA 182
+A A N S +RR R R+ A V+G PRQ RGR+A AA
Sbjct: 296 AASSSGAVNNSASARRSRSRNRAAAVAAAAIAATVQGRANPRQRRGRSAGAA 347
>AE014297-122|AAF52112.1| 421|Drosophila melanogaster CG9775-PA,
isoform A protein.
Length = 421
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +3
Query: 48 SAVEHSAQNKSYPSRRVRDRSDKHG-------AVVRGTRQPRQWRGRTAAAA 182
+A A N S +RR R R+ A V+G PRQ RGR+A AA
Sbjct: 296 AASSSGAVNNSASARRSRSRNRAAAVAAAAIAATVQGRANPRQRRGRSAGAA 347
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,133,248
Number of Sequences: 53049
Number of extensions: 287075
Number of successful extensions: 979
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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