Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0319
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical ... 51 3e-07
AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D prot... 51 3e-07
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 42 1e-04
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 42 1e-04
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 42 1e-04
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 42 1e-04
Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein. 42 2e-04
Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical pr... 31 0.44
U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein. 31 0.44
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 27 7.2
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 27 7.2
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 27 7.2
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 27 7.2
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 27 7.2
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 26 9.5
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 26 9.5
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 26 9.5
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 26 9.5
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 26 9.5
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 26 9.5
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 26 9.5
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 26 9.5
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 26 9.5
>AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical
protein Y38F1A.5 protein.
Length = 405
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
EE +YF VQ ITP R +W+ +V ++ C +VF LA+S +DRF+S+
Sbjct: 83 EEALQPNYHYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSV 139
>AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D
protein.
Length = 405
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 244 EERYAVTANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
EE +YF VQ ITP R +W+ +V ++ C +VF LA+S +DRF+S+
Sbjct: 83 EEALQPNYHYFTGVQENITPFHREQAIDWIYDVAKEENCDGDVFLLAVSLIDRFMSV 139
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 310 RRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
RR++ +WM+EVCE E F LA+ ++DR+L
Sbjct: 259 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYL 291
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 310 RRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
RR++ +WM+EVCE E F LA+ ++DR+L
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYL 294
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 310 RRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
RR++ +WM+EVCE E F LA+ ++DR+L
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYL 294
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 310 RRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
RR++ +WM+EVCE E F LA+ ++DR+L
Sbjct: 262 RRILIDWMMEVCESEKLHRETFHLAVDYVDRYL 294
>Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical
protein ZK507.6 protein.
Length = 485
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 283 VQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
+Q+++ MR ++ +W +V ++ Q+E F LA+S +DR LSM
Sbjct: 236 IQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSM 279
>U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein.
Length = 485
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 283 VQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFLSM 414
+Q+++ MR ++ +W +V ++ Q+E F LA+S +DR LSM
Sbjct: 236 IQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSM 279
>Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical
protein ZC168.4 protein.
Length = 361
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 292 EITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
E TP MRR++ +W+++V E L + LDR L
Sbjct: 104 EPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRML 142
>U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein.
Length = 361
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 292 EITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRFL 408
E TP MRR++ +W+++V E L + LDR L
Sbjct: 104 EPTPKMRRILVDWLVQVHVRFHLTPETLHLTVFILDRML 142
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 330 PLGDETAHVRCDLGLHSAEVVSGDGIA 250
PLG T CD LHS +V+ G++
Sbjct: 124 PLGSPTTCAACDQALHSGQVLLALGLS 150
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 330 PLGDETAHVRCDLGLHSAEVVSGDGIA 250
PLG T CD LHS +V+ G++
Sbjct: 110 PLGSPTTCAACDQALHSGQVLLALGLS 136
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 28 RRSLPTDQLSSTPRRTNHILRDAYVTV 108
RRS P D++ P +H RD++V++
Sbjct: 117 RRSTPKDEIKKVPDDAHHKKRDSHVSL 143
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 28 RRSLPTDQLSSTPRRTNHILRDAYVTV 108
RRS P D++ P +H RD++V++
Sbjct: 117 RRSTPKDEIKKVPDDAHHKKRDSHVSL 143
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 28 RRSLPTDQLSSTPRRTNHILRDAYVTV 108
RRS P D++ P +H RD++V++
Sbjct: 117 RRSTPKDEIKKVPDDAHHKKRDSHVSL 143
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 330 PLGDETAHVRCDLGLHSAEVVSGDGIA 250
PLG T CD LHS +V+ G++
Sbjct: 124 PLGSPTTCAACDQALHSGQVLLALGLS 150
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 262 TANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRF 405
T YFG ++TP +R +V E E+ EVF A+ L F
Sbjct: 645 TLFYFGNAPEKLTPQIRPIVETMQTE--ENDAMASEVFRGAVPLLVMF 690
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 262 TANYFGTVQTEITPHMRRLVAEWMLEVCEDRGCQEEVFXLAISFLDRF 405
T YFG ++TP +R +V E E+ EVF A+ L F
Sbjct: 645 TLFYFGNAPEKLTPQIRPIVETMQTE--ENDAMASEVFRGAVPLLVMF 690
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 578 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 614
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 578 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 614
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 292 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 328
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 416 HMLKNRSRNDIASXKTSSWQPRSSH 342
H+ + RSR+D +S S + RSSH
Sbjct: 273 HLQQQRSRHDSSSGSESEHETRSSH 297
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 416 HMLKNRSRNDIASXKTSSWQPRSSH 342
H+ + RSR+D +S S + RSSH
Sbjct: 273 HLQQQRSRHDSSSGSESEHETRSSH 297
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 142 RVPRTTAPCLSERSRTRREGYDLFCAECSTADRSGAS 32
RVP ++ + RSR +E ++C T+ R A+
Sbjct: 712 RVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAA 748
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 28 RRSLPTDQLSSTPRRTNHILRD 93
RRSLP+ + +PRR N++L D
Sbjct: 44 RRSLPSTPRTVSPRRLNNLLPD 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,266,840
Number of Sequences: 27780
Number of extensions: 131612
Number of successful extensions: 387
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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