Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0314
         (430 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g03140.1 68418.m00262 lectin protein kinase family protein co...    27   4.1  
At2g47500.1 68415.m05929 kinesin motor protein-related                 27   7.1  
At4g23150.1 68417.m03341 protein kinase family protein contains ...    26   9.4  

>At5g03140.1 68418.m00262 lectin protein kinase family protein
           contains Pfam domains, PF00138: Legume lectins alpha
           domain, PF00139: Legume lectins beta domain and PF00069:
           Protein kinase domain
          Length = 711

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 304 LGGVKISSKDGSKVTTVVATPGQGPDRTQEVSYADMK 414
           LG V I  K G+ V + +   G G   T  VSY+++K
Sbjct: 181 LGNVDIDLKSGNAVNSWITYDGSGRVLTVYVSYSNLK 217


>At2g47500.1 68415.m05929 kinesin motor protein-related 
          Length = 974

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = +1

Query: 232 RTTSFAEGSKSVRKTFDNQPPKPPLGGVKISSKDGSKVTTVVATPGQGPDRTQEVSYADM 411
           R   F  G  S   T  N   +    G+  +S+ G  + +       GP  TQE  ++DM
Sbjct: 411 RVRPFLPGQSSFSSTIGNM--EDDTIGINTASRHGKSLKSFTFNKVFGPSATQEEVFSDM 468

Query: 412 K 414
           +
Sbjct: 469 Q 469


>At4g23150.1 68417.m03341 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 659

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 289 PPKPPLGGVKISSKDGSKVTTVVA 360
           PP PPL    +S K G+    VVA
Sbjct: 255 PPLPPLASPSLSDKSGNSNVVVVA 278


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,768,167
Number of Sequences: 28952
Number of extensions: 137212
Number of successful extensions: 383
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)