Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0306
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061614-1|AAL29162.1|  615|Drosophila melanogaster SD08036p pro...    28   5.8  
AE014296-3096|AAF49200.3|  615|Drosophila melanogaster CG3808-PA...    28   5.8  

>AY061614-1|AAL29162.1|  615|Drosophila melanogaster SD08036p
           protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 263 NQPRQARNLQGLLRFEWKPQKLKMHQGTRNWDQLMKKDA 379
           +Q  Q R L+ L  ++WK + LK H    + D L KK A
Sbjct: 106 SQEDQQRALEILNGYKWKGKVLKAHVAKASADPLQKKRA 144


>AE014296-3096|AAF49200.3|  615|Drosophila melanogaster CG3808-PA
           protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 263 NQPRQARNLQGLLRFEWKPQKLKMHQGTRNWDQLMKKDA 379
           +Q  Q R L+ L  ++WK + LK H    + D L KK A
Sbjct: 106 SQEDQQRALEILNGYKWKGKVLKAHVAKASADPLQKKRA 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,528,508
Number of Sequences: 53049
Number of extensions: 297462
Number of successful extensions: 789
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)