Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0294
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.2  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
 Frame = +2

Query: 509 YEFDLYITLTLTF----YWNPEYVRKWSCKIEIE 598
           YE  L    TL +    +W P  + K SC++ +E
Sbjct: 126 YEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVE 159


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -3

Query: 680 WPMEPRSGVNINKCQIYIDS*CKLIQTAQFRFYMTIF 570
           WP+ PR     +KC I I     LI       + T++
Sbjct: 241 WPLRPRITKTCSKCLIGIVWIIALITAVPIAIFSTLY 277


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 461 LFRPSIISLLCYLRFRYEFDLYITLTLTFY----WNPEYVRKWSCKIEIE 598
           ++RP I+ L       +E  L    TL +     W P  + K SC+I++E
Sbjct: 105 IWRPDIV-LYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVE 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,360
Number of Sequences: 2352
Number of extensions: 13247
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)