Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0290
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    27   0.12 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.12 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/64 (23%), Positives = 26/64 (40%)
 Frame = +2

Query: 206 IEFVYLIINRYLIVMYLYHFYNSNNQSTIFSIVSMEHFFYVSIIKCCANPATSTRVTDPL 385
           +++  ++++ + IV Y+Y          I  I+  E FF   I +      T  RV   L
Sbjct: 36  VQYPRIVVSTFNIVFYMYTLILEERFKLINLIIKQEEFFSPKIKRMVLLHKTLVRVAKSL 95

Query: 386 RYTF 397
              F
Sbjct: 96  NQVF 99


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 239 LIVMYLYHFYNSNNQSTI--FSIVSMEHFFYVSIIKCCA 349
           +I++ +Y+FY +    T+    +V + +F+Y+ ++ CCA
Sbjct: 233 IILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCA 271


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = -2

Query: 278 YCCYKNDIGTLRLNIYL*LNKQI-----RFTYKLYRVVLNRFCAVEKNLYKTLTETRQYF 114
           +C   +++  +  N ++ LN Q+         K   VVL R C +  +L K +T   + F
Sbjct: 537 HCYLASELVLMLKNRFVTLNVQLTKLTKNCATKAQSVVLGRICTLHHHLSKLVTRFNEIF 596


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,809
Number of Sequences: 336
Number of extensions: 2470
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)