Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0290
(717 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 5.0
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 22 6.7
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 8.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.8
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 8.8
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 21 8.8
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 370 SRACRRIRATLYNTHIKKMFHT 305
S A R ++T Y HIK +HT
Sbjct: 310 SLAFRVFQSTQYIRHIKSPYHT 331
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 558 MYSVFNMIILVRESKFVQINLIN 490
++SVF+ +ILV + +NL N
Sbjct: 65 LFSVFSFLILVSSYIVILVNLRN 87
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 124 RVSVKVLYKFFSTAQNLFKTTRYNLYVNRICL 219
R Y+ +N FKTTRY R+ L
Sbjct: 10 RARTAFTYEQLVALENKFKTTRYLSVCERLNL 41
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 148 KFFSTAQNLFKTTRYNLYVNRICLFNYK*IF 240
K S+ N + + YN Y N NYK ++
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 284 FDYCCYKNDIGTLRLNIYL 228
F Y CYKN G + +L
Sbjct: 7 FPYLCYKNGGGAFLIPYFL 25
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 295 FDCQYGTFFLCEYYKVLRESGDKHA 369
F CQ LC + R DKHA
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHA 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,744
Number of Sequences: 438
Number of extensions: 3185
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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