Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0286
         (738 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    67   5e-10
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    42   0.021
UniRef50_A1JSY6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_Q63LK8 Cluster: Putative polyketide synthase; n=30; cel...    33   9.7  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 66.9 bits (156), Expect = 5e-10
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -1

Query: 627  DLSFFKRGLWRVLNGTQRLGSAPGIAEVHGRR 532
            D+SFFKRGLWRVL+G QRLGSAPGIAEVHGRR
Sbjct: 955  DMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 41.5 bits (93), Expect = 0.021
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -2

Query: 542 MGDGNHSPLGGPYARLPTRAIKK 474
           MGDGNHSP G PYA LPTRA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_A1JSY6 Cluster: Putative uncharacterized protein; n=1;
           Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
           Putative uncharacterized protein - Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
          Length = 331

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
 Frame = +1

Query: 205 HTYNLEGTQAQEKERVLIFFKARISS*K*TTFYFLEKHTTSLMVS---RHYRSWTSAMSD 375
           +TY L+   + +K R+    K   +  +   FY  +K   +  ++   RHY    S   +
Sbjct: 77  NTYKLKNECSSDKARLKDIHKKLTTKLEELGFYLTDKEGENPEINDRHRHYNVDLSYQGN 136

Query: 376 DSTCITYLLTSLLRDMLVNSLVMLSTKSYYYYYFFIALVGRRAY 507
            S+ ++  L S ++  L+N  + LST+     Y +  LV  ++Y
Sbjct: 137 FSSGVSNPLRSCIKVELINRPINLSTEKLKINYLYQQLVNGKSY 180


>UniRef50_Q63LK8 Cluster: Putative polyketide synthase; n=30; cellular
            organisms|Rep: Putative polyketide synthase -
            Burkholderia pseudomallei (Pseudomonas pseudomallei)
          Length = 5835

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 500  GHTAHLMVSGYRRPWTSAMPGAEPSRC-VPLSTLHKPRLK 616
            G  AH+++  YR P  +A P A P R  VPLS  H  RL+
Sbjct: 3764 GTNAHVVIEEYR-PAAAAAPDASPPRVIVPLSARHPERLR 3802


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,181,916
Number of Sequences: 1657284
Number of extensions: 13148144
Number of successful extensions: 30712
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30606
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)