Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0286
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   7.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.8  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 616 LQTRLVESTQRYAAAWLCPWHC*SPWA 536
           + TR   S+ R A A  CP  C S W+
Sbjct: 45  VMTRSTPSSPRLAQASTCPVPCSSIWS 71


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/47 (23%), Positives = 20/47 (42%)
 Frame = +1

Query: 529 LPSPMDFSNARGRAKPLRTVEYSPQASFEEGQVTAFELNLSLMSVNY 669
           LP  +   N    ++ L T EYS  +   +G +    L     ++N+
Sbjct: 184 LPDSLSVMNGEDESRALCTSEYSDISPLRDGNIAFSSLEGRPSAINF 230


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 641 NSNAVTCPSSNEACGEYSTVR 579
           NSN   CP   E C E S  R
Sbjct: 85  NSNPNQCPIGYETCREISITR 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,344
Number of Sequences: 2352
Number of extensions: 14781
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)