BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Nnor0286 (738 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 23 7.4 AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 7.4 AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 9.8 >U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles gambiae putativetubulin alpha chain mRNA, complete cds. ). Length = 91 Score = 23.4 bits (48), Expect = 7.4 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 616 LQTRLVESTQRYAAAWLCPWHC*SPWA 536 + TR S+ R A A CP C S W+ Sbjct: 45 VMTRSTPSSPRLAQASTCPVPCSSIWS 71 >AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 precursor protein. Length = 1623 Score = 23.4 bits (48), Expect = 7.4 Identities = 11/47 (23%), Positives = 20/47 (42%) Frame = +1 Query: 529 LPSPMDFSNARGRAKPLRTVEYSPQASFEEGQVTAFELNLSLMSVNY 669 LP + N ++ L T EYS + +G + L ++N+ Sbjct: 184 LPDSLSVMNGEDESRALCTSEYSDISPLRDGNIAFSSLEGRPSAINF 230 >AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. Length = 1187 Score = 23.0 bits (47), Expect = 9.8 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -2 Query: 641 NSNAVTCPSSNEACGEYSTVR 579 NSN CP E C E S R Sbjct: 85 NSNPNQCPIGYETCREISITR 105 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 726,344 Number of Sequences: 2352 Number of extensions: 14781 Number of successful extensions: 25 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 75676146 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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