Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0286
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   9.1  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 451 TKSYYYYYFFIALVGRRAYGPPNGEW 528
           T  + YYY +  LV  ++YG     W
Sbjct: 169 TTPWDYYYIYHTLVAEQSYGLTLPSW 194


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 451 TKSYYYYYFFIALVGRRAYGPPNGEW 528
           T  + YYY +  LV  ++YG     W
Sbjct: 184 TTPWDYYYIYHTLVAEQSYGLTLPSW 209


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 451 TKSYYYYYFFIALVGRRAYGPPNGEW 528
           T  + YYY +  LV  ++YG     W
Sbjct: 72  TTPWDYYYIYHTLVAEQSYGLTLPSW 97


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 601 VESTQRYAAAWLCPWHC 551
           V   ++Y A   C WHC
Sbjct: 593 VGQAKKYVAGEQCCWHC 609


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 292 TTFYFLEKHTTSLMVSRHYRSWTSAMSDDSTCITYLLT 405
           T F+FL +   +       ++W +A+   S+  T  +T
Sbjct: 333 TIFWFLTRQNPAAFFRGMMQAWMTALGTASSAATLPIT 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,993
Number of Sequences: 438
Number of extensions: 4032
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)