Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0280
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical ...    28   6.4  
AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...    27   8.5  

>Z77666-5|CAB01230.1|  729|Caenorhabditis elegans Hypothetical
           protein K08E7.7 protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -1

Query: 118 ISTQSLTCNVYIFNGNDKTTIEK--KNFK*TGKST 20
           I T S  C +Y+FN  D  TIE+  K  + T KST
Sbjct: 555 IVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKST 589


>AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical
           protein F56F11.5 protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 349 YTYSSRNPLSSIITLCHIFTSNLIVTLKSYSFIKTRG 239
           Y   S  P+S  I  C +F +  + TL+S  FIK+ G
Sbjct: 295 YILGSFVPISLEILYCVLFITATVSTLRSLEFIKSLG 331


>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 252 SKPEVKKSFSCCHTGESKY*ASVDFYEADS 163
           S   +KK F+  H GE  Y  SV  +E DS
Sbjct: 204 SPNHIKKGFNPAHVGEGLYGNSVHIFEWDS 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,191,184
Number of Sequences: 27780
Number of extensions: 253553
Number of successful extensions: 526
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)