Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0277
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.29 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.3  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 23/73 (31%), Positives = 29/73 (39%)
 Frame = -2

Query: 489  RNSLSEGWMPSSYSVKLKSGGSGRPLGRRAVGSRSSSKKLCTQACSGDRRAPGVYSSSRD 310
            R S S     S    + +SG   R   R   GSRS S+     + S  R   G    SR 
Sbjct: 1063 RRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSR-----SRSRSRSRSGSAKGSRS 1117

Query: 309  TSEMASGGVHARN 271
             S   SGG  +R+
Sbjct: 1118 RSRSGSGGSRSRS 1130


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 59   YTTKIDVWSAGCVVAELL 112
            +T+K DVW+ G  + ELL
Sbjct: 1013 FTSKSDVWAFGITIWELL 1030


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 9   YVRVITALRSS---SLAPPTTPRKLTCGARDALSLSCCWV 119
           Y+ VI+ L S    S A P+ PRK     +  L L   W+
Sbjct: 136 YIGVISRLHSVVEFSSAKPSDPRKRVRPLKKQLDLEAAWM 175


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 45  LAPPTTPRKLTCGARDALSLSCCWVNRYSQEI 140
           LAP TTP      A +A+S    W+  +  E+
Sbjct: 679 LAPGTTPAAAAVVAEEAVSAVDRWLREHHLEL 710


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,390
Number of Sequences: 2352
Number of extensions: 10218
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)