Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0275
(358 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 90 4e-19
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 90 5e-19
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 89 1e-18
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 88 2e-18
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 70 6e-13
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 44 4e-05
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 42 1e-04
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 0.27
08_01_0017 + 132109-132924 31 0.35
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 0.61
08_01_0680 - 5958066-5960253,5960707-5961503 29 1.1
12_01_0725 + 6428572-6428817 28 2.5
01_06_1642 + 38857326-38857581,38858577-38858818,38859001-388600... 28 2.5
01_06_0416 - 29195666-29196946 28 2.5
03_05_0031 + 20040889-20041592,20041932-20041977 27 4.3
03_01_0221 + 1752500-1752868,1753301-1753436,1753850-1753989,175... 27 4.3
06_03_1133 - 27886823-27887088,27887837-27888629,27888674-27889000 27 5.7
06_03_1084 + 27483276-27483492,27483991-27484121,27484685-274847... 27 5.7
08_01_0671 - 5781393-5782503,5782572-5782675 26 7.6
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 26 7.6
02_05_0741 + 31408615-31409130 26 7.6
02_02_0701 - 13067547-13067580,13067725-13067864,13068525-130686... 26 7.6
01_05_0014 - 17162664-17163500 26 7.6
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 90.2 bits (214), Expect = 4e-19
Identities = 42/92 (45%), Positives = 62/92 (67%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 261
SG L+ P NKG+AF+ +ER + GLLPP V +Q+ QV+ ++ +Y PL +Y+
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158
Query: 262 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
+M L +RNE LFY+ + DNV E++P+VYTPT
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPT 190
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 89.8 bits (213), Expect = 5e-19
Identities = 42/92 (45%), Positives = 60/92 (65%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 261
SG + L+ P NKG+AF ER+ + GLLPP + +QE Q +I +Y+ PL KY+
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112
Query: 262 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
+M L + NE LFY+ + DNV E++P+VYTPT
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPT 144
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 88.6 bits (210), Expect = 1e-18
Identities = 42/92 (45%), Positives = 62/92 (67%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 261
SG L+ P NKG++FT +ER + GLLPP V +QE Q + ++ +++ PL +Y+
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92
Query: 262 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
LM L +RNE LFY+ + DNV E++P+VYTPT
Sbjct: 93 ALMDLQERNERLFYKLLIDNVEELLPVVYTPT 124
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 88.2 bits (209), Expect = 2e-18
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 261
SG L+ P NKG+AF+ ER + GLLPP + +QE Q + ++ Y PL +YI
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89
Query: 262 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
+M L +RNE LFY+ + DNV E++P+VYTPT
Sbjct: 90 AMMDLQERNERLFYKLLIDNVEELLPVVYTPT 121
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 69.7 bits (163), Expect = 6e-13
Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Frame = +1
Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 243
G D L P NK AF + ER LG+ GLLPPRV + E+Q + S E+
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105
Query: 244 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
L K+ L L DRNE L+YR + DN+ + PI+YTPT
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPT 146
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 210
G D L P N+G F++ ER LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
Score = 41.9 bits (94), Expect = 1e-04
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Frame = +1
Query: 13 YSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQL------LGIHGLL 174
+S ERDR+GL G S +D P L F E + + L +
Sbjct: 60 FSMTERDRLGLRGLLPPNVVSSQQQIDRFT-PTLKYQYKFHSEIQHIDAKGLALNYLNIS 118
Query: 175 PPRVKTQEEQVELCKLSIDRYEN--PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPI 342
P ++ + V K + D + PL K+ L L DRNE ++Y+ + DN+ E PI
Sbjct: 119 PAICESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPI 178
Query: 343 VYTPT 357
VYTPT
Sbjct: 179 VYTPT 183
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 41.9 bits (94), Expect = 1e-04
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +1
Query: 280 DRNEHLFYRFVADNVAEMMPIVYTPT 357
+R+E LFY+ + DNV E++P+VYTPT
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPT 30
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 0.27
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 122 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 18
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>08_01_0017 + 132109-132924
Length = 271
Score = 30.7 bits (66), Expect = 0.35
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 257 YLLSGFSYLSIESLHSSTCSSC 192
YL +GFS+ S +S HSSTCS C
Sbjct: 84 YLSAGFSFASRDS-HSSTCSCC 104
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.9 bits (64), Expect = 0.61
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 158 PKS*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 30
P+S SS K +PL RP SRPE P S P P S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>08_01_0680 - 5958066-5960253,5960707-5961503
Length = 994
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 4 KCTYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGL 114
K Y E R+ IG WGSG G+ + HL + L
Sbjct: 380 KKEYWESIRNSIGTWGSGTNPTLEGMRQILHLSYKDL 416
>12_01_0725 + 6428572-6428817
Length = 81
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 146 RSSMVKAMPLLRP-GCLRWSRPERPLVGCPSPEP-HNP 39
R+ V+ P++ P GC R E CP+P P H+P
Sbjct: 44 RALQVRPSPVVEPSGCCSGHRSEAVASWCPNPTPCHDP 81
>01_06_1642 +
38857326-38857581,38858577-38858818,38859001-38860004,
38860170-38860587,38860673-38860789
Length = 678
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 173 YHHESRRKRSRLNYASSRSTDTKIHLTSTSILWGSW 280
++ +SRR++ N+ +SR T + L ++LW W
Sbjct: 604 HYQKSRRQKEHDNFWNSRWTRKFLFLLCLAVLWKHW 639
>01_06_0416 - 29195666-29196946
Length = 426
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 152 SWAYTGCYHHESRRKRSRLNYASSRSTDTKIHLTSTSILWGSW 280
SW G E R + + S +TD +++LT S W SW
Sbjct: 204 SWTACGPMPAELRESAAA-TWLSVAATDQRVYLTDRSTGWASW 245
>03_05_0031 + 20040889-20041592,20041932-20041977
Length = 249
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 140 SMVKAMPLLRPGCLRWSRPERPLVGCPSPEP 48
++V+ +PL+ L W E P P P+P
Sbjct: 4 TLVRLLPLVLVVALAWPAAEAPAAASPPPDP 34
>03_01_0221 +
1752500-1752868,1753301-1753436,1753850-1753989,
1754083-1754206,1754960-1755363
Length = 390
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 73 SGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLP 177
S ++ L L HP L K + + EER+LL ++ +P
Sbjct: 124 SEVNFLGRLVHPNLVKLLGYCKEERELLLVYEFMP 158
>06_03_1133 - 27886823-27887088,27887837-27888629,27888674-27889000
Length = 461
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 91 DHLKHPGLNKGMAFTIEERQLLGIHGLL 174
+HL+ P L KG EER +L +HGLL
Sbjct: 73 NHLR-PDLRKGPFSPDEERLILRLHGLL 99
>06_03_1084 +
27483276-27483492,27483991-27484121,27484685-27484740,
27484834-27484891,27484970-27485113,27485270-27485353,
27485434-27485514,27485776-27485889,27486196-27486281,
27486376-27486436,27487343-27487525,27487987-27488038,
27488080-27488135,27488197-27488258,27488498-27488581,
27488899-27489030,27490220-27490316
Length = 565
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 254 LLSGFSYLSIESLHSSTCSSCVLTRGGNNPCMPKS*RSSMVKAMPLLRPGC 102
LL FS S H C CV T P P + RS V + + GC
Sbjct: 35 LLHAFSAASRRGRHEVAC--CVRTEPAPRPASPVAVRSRSVHSTENYKKGC 83
>08_01_0671 - 5781393-5782503,5782572-5782675
Length = 404
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 229 DRYENPLNKYIYLMGLLDRN--EHLFYRFVADNVAEMMP 339
+R+ + LN+Y+YL G LD E +R + +A P
Sbjct: 177 NRHGDVLNRYMYLSGRLDMRQVERTVHRLIGSGMAMHAP 215
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 26.2 bits (55), Expect = 7.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 62 PSPEPHNPIRSRSISLYVH 6
P+P PH PI S++++L H
Sbjct: 61 PTPMPHTPISSQTLTLAPH 79
>02_05_0741 + 31408615-31409130
Length = 171
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -3
Query: 143 SSMVKAMPLLRPGCL---RWSRPERPLV 69
SS V+ +P LRP C RW R ER ++
Sbjct: 76 SSSVQILPPLRPRCTRIRRWQRQERRIL 103
>02_02_0701 -
13067547-13067580,13067725-13067864,13068525-13068659,
13068761-13068808,13068834-13068859,13068990-13069057,
13069101-13069112,13070359-13070415,13070817-13070935,
13071700-13071810,13076755-13077066
Length = 353
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 1 RKCTYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGM 126
RKC R+RIG +GDG G +H G+ G+
Sbjct: 17 RKCR--SRRRERIGAEVAGDGDDDEGSGERKDQRHDGVEAGL 56
>01_05_0014 - 17162664-17163500
Length = 278
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 110 PGCLR-WSRPERPLVGCPSPEPHNPIRSRS 24
PG L+ WS P LV P PH+ RS S
Sbjct: 53 PGSLQIWSPPASSLVRPNPPRPHSAARSLS 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,827,861
Number of Sequences: 37544
Number of extensions: 226097
Number of successful extensions: 684
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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