Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0275
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...   110   2e-25
Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical pr...    29   0.72 
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    28   1.7  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    28   1.7  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    28   1.7  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    28   1.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   2.2  
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr...    27   3.9  
U53180-2|AAK68284.1|  477|Caenorhabditis elegans Hypothetical pr...    27   3.9  
U23177-1|AAA64332.1|  431|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AF077546-7|AAC26319.1|  534|Caenorhabditis elegans Hypothetical ...    27   5.1  
Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical pr...    26   6.7  
U42846-1|AAA83600.2|  872|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical pr...    26   8.9  

>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score =  110 bits (265), Expect = 2e-25
 Identities = 52/91 (57%), Positives = 64/91 (70%)
 Frame = +1

Query: 85  GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYIY 264
           G+D LK PGLNKGMAF++ ERQ LG+HGLLPP   T+E+Q       + +  + L KYI 
Sbjct: 51  GIDLLKSPGLNKGMAFSLHERQYLGVHGLLPPAFMTEEQQAYRIITKLRQQPDNLAKYIQ 110

Query: 265 LMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
           L  L DRNE L+YR + DNV E+MPIVYTPT
Sbjct: 111 LDSLQDRNEKLYYRVLCDNVKELMPIVYTPT 141


>Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical
           protein F22B8.1 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 245 HLTSTSILWGSWTAMSICSTVS 310
           H TS ++LW SW+A+ I +T+S
Sbjct: 200 HETSPAVLWKSWSAILILTTLS 221


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +1

Query: 172  LPPRVKTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEH 294
            L  ++K  + ++EL +  + ++E+ L+ ++   G+L RNEH
Sbjct: 1215 LTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGIL-RNEH 1254


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +1

Query: 172  LPPRVKTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEH 294
            L  ++K  + ++EL +  + ++E+ L+ ++   G+L RNEH
Sbjct: 1215 LTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGIL-RNEH 1254


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 TSILWGSWTAMSICSTVS 310
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 TSILWGSWTAMSICSTVS 310
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 TSILWGSWTAMSICSTVS 310
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 TSILWGSWTAMSICSTVS 310
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 167 PCMPKS*RSSMVKAMPLLRPGCLRWSRPERPLVGCPSPEPHNPIRS 30
           P  P+  R+   ++ P  RP     S   RP    PSPEP NP R+
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRT 186


>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical protein
            T01G1.1c protein.
          Length = 1580

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 197  RSRLNYASSRSTDTKIHLTSTSILWGSWTAMSICSTVSSRITWLK 331
            RSR N  SS S+ T   L+S+++L    T  S  S   SRI  +K
Sbjct: 1197 RSRSNLMSSSSSTTTTTLSSSNLLNPRGTTSSSSSKKQSRIVPVK 1241


>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical protein
            T01G1.1c protein.
          Length = 1580

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 197  RSRLNYASSRSTDTKIHLTSTSILWGSWTAMSICSTVSSRITWLK 331
            RSR N  SS S+ T   L+S+++L    T  S  S   SRI  +K
Sbjct: 1197 RSRSNLMSSSSSTTTTTLSSSNLLNPRGTTSSSSSKKQSRIVPVK 1241


>U53180-2|AAK68284.1|  477|Caenorhabditis elegans Hypothetical
           protein D1014.6 protein.
          Length = 477

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 187 KTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEHLFYRFV 312
           KT EEQ EL    + R ENP + +   M  L  +E  F + V
Sbjct: 189 KTTEEQAELPIPIVPRIENPPHYFTVCMATLYGDEPKFLQIV 230


>U23177-1|AAA64332.1|  431|Caenorhabditis elegans Hypothetical
           protein C56G2.5 protein.
          Length = 431

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 79  LSGLDHLKHPGLNKGMAFTIEERQLLGIHGL--LPPRVKTQEEQVELCKLSIDRYE 240
           L G  H+       G  F++  RQ L +  +  L   +  +++ V+ CK+SIDR E
Sbjct: 8   LLGTVHVATSSTPPGSPFSLVNRQFLLLPTMDKLMGEICREKQIVDRCKMSIDRKE 63


>AF077546-7|AAC26319.1|  534|Caenorhabditis elegans Hypothetical
           protein T08E11.8 protein.
          Length = 534

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 184 VKTQEEQVELCKLSIDRYENPLNKYIYLMGLL 279
           V     ++E  KLS D++    NKYI+L G L
Sbjct: 326 VNYSNTKIEDWKLSEDQFVEIFNKYIFLRGAL 357


>Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical
           protein F26E4.3 protein.
          Length = 491

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 265 DRCTC*VDFRICRSRACIVQP 203
           ++CTC   F  C   AC++QP
Sbjct: 147 EKCTCHNGFWKCDGTACLIQP 167


>U42846-1|AAA83600.2|  872|Caenorhabditis elegans Hypothetical
           protein T19D2.1 protein.
          Length = 872

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 230 TDTKIHLTSTSILWGSWTAMSICST 304
           T T+  L + S LW  W++ S CST
Sbjct: 815 TTTRRPLVNRSGLWTGWSSWSSCST 839


>Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical
           protein K01C8.5 protein.
          Length = 707

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 179 HESRRKRSRLNYASSRSTDTKIHLTSTS 262
           H   R  SRL+     S+D ++H  STS
Sbjct: 294 HNKNRTESRLHQKEKSSSDEEVHEKSTS 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,790,113
Number of Sequences: 27780
Number of extensions: 176827
Number of successful extensions: 549
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)