Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0275
(358 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25880.1 68418.m03071 malate oxidoreductase, putative similar... 91 2e-19
At5g11670.1 68418.m01364 malate oxidoreductase, putative similar... 90 5e-19
At2g19900.1 68415.m02326 malate oxidoreductase, putative similar... 89 6e-19
At1g79750.1 68414.m09304 malate oxidoreductase, putative similar... 87 4e-18
At2g13560.1 68415.m01495 malate oxidoreductase, putative similar... 75 1e-14
At4g00570.1 68417.m00080 malate oxidoreductase, putative similar... 70 4e-13
At5g59080.1 68418.m07402 expressed protein 28 1.6
At1g40115.1 68414.m04755 hypothetical protein 27 2.8
At3g24780.1 68416.m03110 hypothetical protein 27 3.7
At1g51910.1 68414.m05851 protein kinase family protein contains ... 27 3.7
At1g08620.1 68414.m00955 transcription factor jumonji (jmj) fami... 27 3.7
At4g22165.1 68417.m03204 F-box family protein contains F-box dom... 27 4.9
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 27 4.9
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 26 6.4
At3g50070.1 68416.m05474 cyclin family protein similar to cyclin... 26 6.4
At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM do... 26 8.5
>At5g25880.1 68418.m03071 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P12628) {Phaseolus vulgaris}
Length = 588
Score = 91.1 bits (216), Expect = 2e-19
Identities = 45/96 (46%), Positives = 62/96 (64%)
Frame = +1
Query: 70 TSGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 249
TS SG ++ P NKG+AFT +ER I GLLPP V +Q+ Q ++ +Y PL
Sbjct: 44 TSVASGYTLMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQYTVPL 103
Query: 250 NKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
+Y+ LM L +RNE LFY+ + DNV E++P+VYTPT
Sbjct: 104 QRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPT 139
>At5g11670.1 68418.m01364 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP|P12628) {Phaseolus vulgaris}
Length = 588
Score = 89.8 bits (213), Expect = 5e-19
Identities = 43/96 (44%), Positives = 62/96 (64%)
Frame = +1
Query: 70 TSGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 249
TS SG ++ P NKG+AFT +ER + GLLPP + +Q+ Q ++ +Y PL
Sbjct: 44 TSVASGYTLMRDPRYNKGLAFTDKERDAHYLTGLLPPVILSQDVQERKVMHNLRQYTVPL 103
Query: 250 NKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
+Y+ LM L +RNE LFY+ + DNV E++P+VYTPT
Sbjct: 104 QRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPT 139
>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P51615) {Vitis vinifera}
Length = 581
Score = 89.4 bits (212), Expect = 6e-19
Identities = 45/92 (48%), Positives = 60/92 (65%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 261
SG L+ P NKG+AFT +ER + GLLPP V Q+ Q + +I +Y+ PL KY+
Sbjct: 41 SGYSLLRDPRYNKGLAFTEKERDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQFPLQKYM 100
Query: 262 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
L L +RNE LFY+ + DNV E++PIVYTPT
Sbjct: 101 ALTELQERNERLFYKLLIDNVEELLPIVYTPT 132
>At1g79750.1 68414.m09304 malate oxidoreductase, putative similar to
malate oxidoreductase (NADP-dependent malic enzyme)
GB:P34105 (Populus balsamifera subsp. trichocarpa)
Length = 646
Score = 86.6 bits (205), Expect = 4e-18
Identities = 40/92 (43%), Positives = 61/92 (66%)
Frame = +1
Query: 82 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 261
SG L+ P NKG+AF+ ER + GLLPP V +Q+ QV+ ++ +Y+ PL KY+
Sbjct: 106 SGYTLLRDPHHNKGLAFSHRERDAHYLRGLLPPTVISQDLQVKKIMHTLRQYQVPLQKYM 165
Query: 262 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
+M L + NE LFY+ + D+V E++P++YTPT
Sbjct: 166 AMMDLQETNERLFYKLLIDHVEELLPVIYTPT 197
>At2g13560.1 68415.m01495 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum
tuberosum}
Length = 623
Score = 74.9 bits (176), Expect = 1e-14
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Frame = +1
Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYE-------- 240
GLD L P NKG AFT+ ER L + GLLPP V E+Q+ + R E
Sbjct: 46 GLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEEQARDGPS 105
Query: 241 --NPLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
N L K+ L L DRNE ++Y+ + +N+ E PIVYTPT
Sbjct: 106 DPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPT 146
>At4g00570.1 68417.m00080 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum
tuberosum}
Length = 607
Score = 70.1 bits (164), Expect = 4e-13
Identities = 43/101 (42%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Frame = +1
Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 243
G D L P NK F + ER LGI GLLPPRV T +Q + S EN
Sbjct: 39 GADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVMTCVQQCDRFIESFRSLENNTKGEPE 98
Query: 244 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPT 357
L K+ L L DRNE L+YR + DN+ + PI+YTPT
Sbjct: 99 NVVALAKWRMLNRLHDRNETLYYRVLIDNIKDFAPIIYTPT 139
>At5g59080.1 68418.m07402 expressed protein
Length = 135
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +1
Query: 43 LWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKL 222
L+GS D P S SG+ P +KG A G + QE++VE C L
Sbjct: 21 LFGSKDPSPPSSSSGIFSTMFPHPSKGSA-RDGSNSKHGSQAQRRESLNAQEDRVEPCHL 79
Query: 223 SIDRY 237
S Y
Sbjct: 80 SSSLY 84
>At1g40115.1 68414.m04755 hypothetical protein
Length = 150
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 215 HSSTCSSCVLTRGGNNPCMPKS*RSSMVKAMPLLRPGCLRWSRPERPLVGCPSPEPHN 42
HS+T SS RG ++ P + RSS + + + RP ++RP + PSP+ H+
Sbjct: 19 HSTTRSS----RGHHHFTSPLAPRSSAI--ISITRPSLDHFTRPRGRVPSSPSPDRHS 70
>At3g24780.1 68416.m03110 hypothetical protein
Length = 715
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -3
Query: 170 NPCMPKS*RSSMVKAMPLLRPGCLRWSRPERPLVGCPSPEPHNPIRSRSISL 15
N C P + S +K + +R RP RP+ P P+R R + L
Sbjct: 52 NTCRPSVPKVSNIKKSTKVNVNPVRPVRPVRPIRPVRPVRPVRPVRRRRVDL 103
>At1g51910.1 68414.m05851 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 876
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 61 GQPTSGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRV 186
G P L+ D +KH NK + I+E Q HG+ P V
Sbjct: 468 GNPKLNLTVPDSIKHRINNKSLKLIIDENQSSEKHGIKFPLV 509
>At1g08620.1 68414.m00955 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains Pfam domains, PF02375: jmjN domain, PF02373:
jmjC domain and PF02928: C5HC2 zinc finger
Length = 1183
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 52 SGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKL--S 225
+G G P S +G++ L+ G G FT+++ Q K++ + CK+ S
Sbjct: 218 NGMGDPCSASTGMNELETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNS 277
Query: 226 IDRYENPL 249
ID +E L
Sbjct: 278 IDCWEPAL 285
>At4g22165.1 68417.m03204 F-box family protein contains F-box domain
Pfam:PF00646
Length = 363
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 354 RSVHNWHHFSHVIRDETVEQMLIAVQEPHKIDVLVKW 244
R++++W HFSH ++ + + E K D +V W
Sbjct: 140 RTIYDWFHFSHGHYSFSLSSPVFWIDEESK-DYIVMW 175
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 1648
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 16 SEMERDRIG--LWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVK 189
+++ D +G +W + P G+SGL HL + F + R + G GLL PRV+
Sbjct: 135 NKVSDDEVGSVIWSASFDGPGEGVSGLAHL------ASIKF-LTLRLMPGNEGLLSPRVR 187
Query: 190 TQ 195
+
Sbjct: 188 VE 189
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 26.2 bits (55), Expect = 6.4
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = -3
Query: 275 SPIR*MYLLSGFSYLSIESLHSSTCSSCVLTR--GGNNPCMPKS*RSSMVKAMPLLRPGC 102
SP M L SG + +++ + + +S V R P P+S + + +P P
Sbjct: 63 SPEEAMKLTSGGNGVAVSPVKPARATSQVPKRVPPSRTPEAPRSVPACPIPEIPRPVPAR 122
Query: 101 LRWSRPERPLVGCPSPEPHNPIRSRSIS 18
P RP+ P+PE P+ +R IS
Sbjct: 123 PTPETP-RPVTARPTPEIPRPVPARPIS 149
>At3g50070.1 68416.m05474 cyclin family protein similar to cyclin
D3.1 protein [Nicotiana tabacum] GI:4160300, CycD3;2
[Lycopersicon esculentum] GI:6434199; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 361
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 70 WAVRPRSPIIRYDHVPFRYTYTS 2
W + P +PI +DH+ RY++ S
Sbjct: 183 WRMHPVTPISFFDHIIRRYSFKS 205
>At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 844
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 97 LKHPGLNKGMAFTIEERQLLGIHGLLPPRV 186
L+H +N G+A I+E +L G+ PP V
Sbjct: 239 LEHGYINFGLAPVIKEAKLRSFDGVEPPNV 268
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,374,593
Number of Sequences: 28952
Number of extensions: 166642
Number of successful extensions: 522
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 459356736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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