Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0274
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0668 - 4882174-4884204 377 e-105
07_01_0075 - 558829-560859 374 e-104
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 87 1e-17
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 48 6e-06
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 44 1e-04
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 43 3e-04
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 34 0.099
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 33 0.17
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 33 0.30
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 33 0.30
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 32 0.40
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 32 0.40
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 31 1.2
02_04_0230 + 21103524-21103746,21105393-21105661,21105845-211060... 31 1.2
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 30 1.6
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 30 1.6
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 30 1.6
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 30 2.1
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 29 2.8
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 29 2.8
08_02_1310 - 26037025-26038074 29 4.9
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 29 4.9
05_07_0147 - 28022018-28022104,28022207-28022287,28022513-280226... 29 4.9
03_02_0921 + 12414932-12416569 28 6.5
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 28 6.5
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 28 8.6
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 28 8.6
>06_01_0668 - 4882174-4884204
Length = 676
Score = 377 bits (927), Expect = e-105
Identities = 169/224 (75%), Positives = 200/224 (89%)
Frame = +1
Query: 49 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 228
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF++
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYSISRIRQFYMRKVKYTQSNFYE 60
Query: 229 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 408
+LS +I +FP+LDD+HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYG
Sbjct: 61 KLSTVIDDFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 409 DSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVG 588
DSLYRCK LK AALGRM T++KR +L YLEQ+RQH+ARLPSIDP TRT++ICG+PNVG
Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVG 180
Query: 589 KSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
KSSF+NKITRADV+VQPYAFTTKSL+VGH DYKYLR+QVIDTPG
Sbjct: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPG 224
>07_01_0075 - 558829-560859
Length = 676
Score = 374 bits (919), Expect = e-104
Identities = 168/224 (75%), Positives = 199/224 (88%)
Frame = +1
Query: 49 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 228
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF++
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYE 60
Query: 229 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 408
+LS +I +FP+LD +HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYG
Sbjct: 61 KLSTVIDDFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 409 DSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVG 588
DSLYRCK LK AALGRM T++KR +L YLEQ+RQH+ARLPSIDP TRT++ICG+PNVG
Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVG 180
Query: 589 KSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
KSSF+NKITRADV+VQPYAFTTKSL+VGH DYKYLR+QVIDTPG
Sbjct: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPG 224
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Frame = +1
Query: 64 FKKIAVVPTAKDFIDIILSKTQRKTPTV-VHKHYKISRIRGFYIRKVKYTQQNFHDRLSR 240
F++I +V A D + K++ PT + K R +G +++ + L
Sbjct: 83 FQRIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRERNKG--AKQLDALMKEISVPLRT 140
Query: 241 IIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLY 420
+ FPK D+HP+ L+ + + + +Y+ + +++ R I++V K + + SL
Sbjct: 141 YTENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASVC--AKSLT 198
Query: 421 RCKQLKRAALGR--MATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKS 594
+ + +R + GR + + + L + + L +P +DP+ T+ + G PNVGKS
Sbjct: 199 KREAEERLSEGRKKLEEAFEHGKWVIDDLVNIAKTLRSMPVVDPHIPTLCLVGSPNVGKS 258
Query: 595 SFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
S + ++ EV Y FTT+ + +GH + R+QV DTPG
Sbjct: 259 SLVRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPG 300
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +1
Query: 565 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
+ GFP+VGKS+ +NK+T EV Y FTT + G YK + Q++D PG
Sbjct: 80 LVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPG 131
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 565 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK-YLRWQVIDTPG 720
+ G PN GKS+ ++ ++RA E+ YAFTT +G Y+ Y +V D PG
Sbjct: 344 LVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPG 396
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 559 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
+ + GFP+VGKS+ + +T E Y FTT + G Y + Q++D PG
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPG 118
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 34.3 bits (75), Expect = 0.099
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 547 YTRTIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTK-SLYVGHTDYKYLRWQVIDTPG 720
Y I I G PNVGKSS +N + D V P + TT+ ++ T ++++IDT G
Sbjct: 372 YIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAG 431
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 559 IIICGFPNVGKSSFINKI---TRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
+ I G PNVGKS+ N++ RA V +P T LY G + + + VIDT G
Sbjct: 163 VAIIGRPNVGKSALFNRLVGGNRAIVVDEP-GVTRDRLY-GRSYWGDREFMVIDTGG 217
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 556 TIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
T+ I G PNVGKSS IN + R+ V V T+S+ D K +++D PG
Sbjct: 270 TVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGVTRSMQEVQLDKKV---KLLDCPG 322
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 499 LEQVRQH--LARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTT 654
LE VR+H L R + + G+ N GKS+ +N++T ADV + F T
Sbjct: 234 LESVRKHRKLYRNRRQSVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFAT 287
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 571 GFPNVGKSSFINKITRADVEVQPYAFTT 654
G PNVGKS+F N +T+ + + + F T
Sbjct: 3 GLPNVGKSTFFNIVTKLSIPAENFPFCT 30
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 565 ICGFPNVGKSSFINKITRADVEVQPYAFTT 654
+ G PN GKS+ ++ IT A ++ Y FTT
Sbjct: 281 LVGLPNAGKSTLLSAITLARPDIADYPFTT 310
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 32.3 bits (70), Expect = 0.40
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 499 LEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTKS-LYVG 672
L V + ARL S D ++ G+PNVGKSS IN + V +V P TK Y+
Sbjct: 300 LLSVLRQFARLKS-DKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYIT 358
Query: 673 HTDYKYLRWQVIDTPG 720
T +L ID PG
Sbjct: 359 LTKRIFL----IDCPG 370
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 565 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVI-DTPG 720
I G PN GKS+ + I+ A + Y FTT +G + V+ D PG
Sbjct: 457 IVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPG 509
>02_04_0230 +
21103524-21103746,21105393-21105661,21105845-21106009,
21106081-21106203,21107261-21107473
Length = 330
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 529 LPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPY--AFTTKSLYVGHTDYKYLR-W 699
LPS D T+++CG GKS+ N I + V Y A T + + T K R
Sbjct: 12 LPSADI---TVVLCGKLGCGKSATGNSIVGREAFVSEYSHASVTSTCQLASTALKDGRTL 68
Query: 700 QVIDTPG 720
VIDTPG
Sbjct: 69 NVIDTPG 75
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 550 TRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 672
T +++ G PNVGKS+ IN I R P K VG
Sbjct: 136 TLLVMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVG 176
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 550 TRTIIICGFPNVGKSSFINKITR 618
T T+++ G PNVGKS+ +N + R
Sbjct: 135 TGTVLLVGIPNVGKSAIVNAMHR 157
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 601 INKITRADVEVQPYAFTTKSLYVGHTDYKYLR 696
++++T A +E QP+ +T+ LY H D + R
Sbjct: 527 VHRVTFAPLEQQPHVASTRDLYARHRDQDFAR 558
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 154 KHYK--ISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYK 327
K YK +S G+Y+ KV + +S + FP +D P ++ N L+D+ K
Sbjct: 423 KRYKELLSDSEGYYVPKVIDELSSKKVLMSEFVPGFP-IDKTDPNWS---NFLFDEPTRK 478
Query: 328 LGLGQLNTARHLIDNVAKDYVRLL 399
L AR DY+R++
Sbjct: 479 FNLIDFGAARDFPKRFVDDYLRMV 502
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 559 IIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
+ I G PNVGKSS +N ++++ V A TT+ + + + ++DT G
Sbjct: 308 VAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHGIPITLLDTAG 362
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 565 ICGFPNVGKSSFINKITR 618
I G+PNVGKSS IN++ +
Sbjct: 405 IVGYPNVGKSSLINRLLK 422
>08_02_1310 - 26037025-26038074
Length = 349
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 298 NVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMA 462
++L + Y+LG +L + + L+DNV + V + Y C +LK+ L +A
Sbjct: 260 HLLAAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYLA 314
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 607 KITRADVEVQPYAFTTKSLYVGHTDYKYLR 696
++T A +E QP+ +T+ LY H D + R
Sbjct: 136 RVTFAPLEQQPHVASTRDLYARHRDQDFAR 165
>05_07_0147 -
28022018-28022104,28022207-28022287,28022513-28022614,
28022701-28022799,28023060-28023185,28023272-28023385,
28023478-28023618,28023717-28023862,28024011-28024386
Length = 423
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 559 IIICGFPNVGKSSFINKITRADVE-VQPYAFTTKSLYVGHTDYKYLRWQVIDTPG 720
+ + G PNVGKS+ IN+I + V TT+ +G + + DTPG
Sbjct: 128 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPG 182
>03_02_0921 + 12414932-12416569
Length = 545
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 490 LTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVE--VQPYAFTTKSL 663
L L ++++ + P I YT TI++ GF VG++ I V + P FT +L
Sbjct: 253 LDLLNKLKESPKQTPDI--YTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNAL 310
Query: 664 YVGH 675
GH
Sbjct: 311 LNGH 314
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 556 TIIICGFPNVGKSSFINKI 612
T+I+ G PNVGKS+ N++
Sbjct: 84 TVILVGRPNVGKSALFNRV 102
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 175 IRGFYIRKVKYTQQNFHDRLSRIIQEFPKLD-DVHPFYADLMNVLYDKDHYKLGLGQLNT 351
+ Y+ +V+ ++ + LSR+ QEF +L +L V ++ LGQL+
Sbjct: 361 LEDLYLSQVQQRKET-EESLSRVQQEFEQLKIQQDEVTVELQRVNEQNENL---LGQLSD 416
Query: 352 ARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMATIM 471
+R + + ++ +LL+ D+ R + R G+M +++
Sbjct: 417 SREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVL 456
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 607 KITRADVEVQPYAFTTKSLYVGHTDYKYLR 696
++T A +E QP+ +T+ LY H D + R
Sbjct: 262 RVTFAPLEQQPHVASTRILYARHRDQDFAR 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,728,276
Number of Sequences: 37544
Number of extensions: 425084
Number of successful extensions: 1053
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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