Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0270
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-li...   171   6e-43
AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical ...   171   6e-43
Z70267-3|CAA94214.1|  534|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z70267-2|CAA94213.1|  525|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical pr...    29   3.4  
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe...    29   3.4  
U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-like
           protein protein.
          Length = 311

 Score =  171 bits (415), Expect = 6e-43
 Identities = 87/223 (39%), Positives = 134/223 (60%)
 Frame = +3

Query: 66  KDFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEEGYFSKETQLKTF 245
           +D   ++IL  +++ K+  V+    D S   ++L  K+ F E     E   +   QL+  
Sbjct: 24  QDAKFQEILGADSSHKSLFVLLSHPDGSQ-GILLANKSPFSEEKSDIEKLLAT-AQLQEI 81

Query: 246 FENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKELTLPHLE 425
             NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY+ +T P++E
Sbjct: 82  SRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVTRPYIE 141

Query: 426 KEQFNLQWVYNILEGKSEQDRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDI 605
           K Q NL WVYN LE +SE D+IV ++   + GFVLL D+KWDG T E LY+LAI  +  +
Sbjct: 142 KYQLNLNWVYNCLEKRSEVDKIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHGL 201

Query: 606 KSLRDLDEQHLPLLKRIRDEGKKTILEKYQVPGSQLRIYLHYQ 734
           KS+RDL    L +L  +RD+  + I +KY +   Q++ Y HYQ
Sbjct: 202 KSVRDLTGDDLEMLYNMRDKSLEAINQKYGLKTDQIKCYFHYQ 244


>AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical
           protein Y113G7A.9 protein.
          Length = 311

 Score =  171 bits (415), Expect = 6e-43
 Identities = 87/223 (39%), Positives = 134/223 (60%)
 Frame = +3

Query: 66  KDFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEEGYFSKETQLKTF 245
           +D   ++IL  +++ K+  V+    D S   ++L  K+ F E     E   +   QL+  
Sbjct: 24  QDAKFQEILGADSSHKSLFVLLSHPDGSQ-GILLANKSPFSEEKSDIEKLLAT-AQLQEI 81

Query: 246 FENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKELTLPHLE 425
             NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY+ +T P++E
Sbjct: 82  SRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVTRPYIE 141

Query: 426 KEQFNLQWVYNILEGKSEQDRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDI 605
           K Q NL WVYN LE +SE D+IV ++   + GFVLL D+KWDG T E LY+LAI  +  +
Sbjct: 142 KYQLNLNWVYNCLEKRSEVDKIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHGL 201

Query: 606 KSLRDLDEQHLPLLKRIRDEGKKTILEKYQVPGSQLRIYLHYQ 734
           KS+RDL    L +L  +RD+  + I +KY +   Q++ Y HYQ
Sbjct: 202 KSVRDLTGDDLEMLYNMRDKSLEAINQKYGLKTDQIKCYFHYQ 244


>Z70267-3|CAA94214.1|  534|Caenorhabditis elegans Hypothetical
           protein K04C1.2b protein.
          Length = 534

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
 Frame = +3

Query: 153 VALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPP--STINGVKTTIIYP 326
           VA +L +       DLS++GY S E+       N +  N E   P    +N     I   
Sbjct: 298 VAKVLPDHEGSSSQDLSDDGYSSPESSSMQLGRNSMTSNEETSHPVQQEMNKTDMVIADV 357

Query: 327 ATDKHIAKFSQQEVHIVLETPE 392
            +   + + SQ  +H   + PE
Sbjct: 358 ISQNRVHQPSQGPLHQEADAPE 379


>Z70267-2|CAA94213.1|  525|Caenorhabditis elegans Hypothetical
           protein K04C1.2a protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
 Frame = +3

Query: 153 VALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPP--STINGVKTTIIYP 326
           VA +L +       DLS++GY S E+       N +  N E   P    +N     I   
Sbjct: 289 VAKVLPDHEGSSSQDLSDDGYSSPESSSMQLGRNSMTSNEETSHPVQQEMNKTDMVIADV 348

Query: 327 ATDKHIAKFSQQEVHIVLETPE 392
            +   + + SQ  +H   + PE
Sbjct: 349 ISQNRVHQPSQGPLHQEADAPE 370


>U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical
           protein T02G5.4 protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +3

Query: 228 TQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKEL 407
           T++K   E  +Y +   FP  TI+           DKHIA F+     ++L + E   E 
Sbjct: 289 TKIKKIKEGSVYSSIPIFPGGTIS-----------DKHIAAFTDGAAAVILASQEAVSEQ 337

Query: 408 TLPHLEK 428
            L  L +
Sbjct: 338 NLKPLAR 344


>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
           defective protein 45 protein.
          Length = 1076

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = +3

Query: 426 KEQFNLQWVYNILEGKS-EQDRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLL-AIVRQR 599
           KE   L  +++ ++ +  +Q   VH+    K    L  DLK   L K+ L+   A+ +Q 
Sbjct: 24  KESDALDTLHDTIKARRHKQWTTVHEQIMIKH-MELCVDLKKQHLAKDALFQYKALTQQI 82

Query: 600 DIKSLRDLDEQHLPLLKRIRDEGKKTILEKYQVPG 704
           ++KSL  +    L L ++  ++ +K  +EK +  G
Sbjct: 83  NVKSLETVVVHFLKLAEQRTEDAQKQSIEKVEEIG 117


>U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical
           protein ZK1127.7 protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +3

Query: 162 ILFEKNAFKENDLSEEGYFSKETQ---LKTFFENDIYGNFECFP-PSTINGVK 308
           ++ +KN  K+  L+EE  ++KET+   LK FF  +I  ++     P  ++G+K
Sbjct: 279 LMQDKNQRKQQGLAEECLYNKETRFVTLKDFFNYEIVCSWNLHSIPCLVDGLK 331


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,189,166
Number of Sequences: 27780
Number of extensions: 343082
Number of successful extensions: 921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)