Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0269
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 214 2e-56
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 214 2e-56
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 214 2e-56
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 214 2e-56
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 214 2e-56
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 214 2e-56
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 213 4e-56
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 211 1e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 207 2e-54
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 9e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 4e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 175 7e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 121 2e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 106 5e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 88 2e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 69 2e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 4e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 34 0.041
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.094
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 0.67
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 0.67
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.7
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 3.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 3.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 3.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 3.6
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 3.6
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 6.2
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 26 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 214 bits (523), Expect = 2e-56
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 214 bits (523), Expect = 2e-56
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 214 bits (523), Expect = 2e-56
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 214 bits (523), Expect = 2e-56
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 214 bits (523), Expect = 2e-56
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 214 bits (523), Expect = 2e-56
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 213 bits (520), Expect = 4e-56
Identities = 95/97 (97%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 211 bits (516), Expect = 1e-55
Identities = 93/97 (95%), Positives = 97/97 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 97
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 207 bits (506), Expect = 2e-54
Identities = 92/95 (96%), Positives = 95/95 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRI 96
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 9e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 4e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDM 346
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 175 bits (427), Expect = 7e-45
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 331
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 332 NWDDMEKIWHHTFYNELRV 388
NWDDMEKIWHHTFYNELRV
Sbjct: 65 NWDDMEKIWHHTFYNELRV 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 121 bits (292), Expect = 2e-28
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +2
Query: 230 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 388
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 53
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 106 bits (255), Expect = 5e-24
Identities = 43/83 (51%), Positives = 61/83 (73%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 302 KYPIEHGIVTNWDDMEKIWHHTF 370
+YP+EHGIV NW DMEKIW + F
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIF 93
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 88.2 bits (209), Expect = 2e-18
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 295
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 296 TLKYPIEHGIVTNWDDMEKIWHHTF 370
+ YP+++GIV NWDDM +W HTF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTF 93
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 68.5 bits (160), Expect = 2e-12
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 241
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 242 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 385
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLR 109
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.2 bits (107), Expect = 4e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 113 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 292
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 293 LTLKYPIEHGIVTNWDDMEKIWHHTF 370
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.2 bits (107), Expect = 4e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 113 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 292
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 293 LTLKYPIEHGIVTNWDDMEKIWHHTF 370
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 33.9 bits (74), Expect = 0.041
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD--EAQS 280
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 281 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNEL 382
KR G + P ++ G++ +W+ EKI H++ N L
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENIL 117
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.094
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 327 TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 151
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 150 HIPEPLSTTNAATSSS 103
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 284 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 129
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 284 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 129
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQG 226
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 202 RGKAPPSGRDGRYGTEG 252
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 177 ASSPAKPALHIPEPLSTTNAATSS 106
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 337 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 227
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 206 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = -3
Query: 360 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIP 235
CQ+FS QLVT+ SMG +++++ + LL + S T + P P
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP 297
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 206 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -1
Query: 296 SGYLFCSVP---HLLHKSPSVPYRPSRPDGGAF 207
SG +F +P HLL + P P P+G +F
Sbjct: 694 SGEIFLKLPELAHLLSSQSTAPLHPKVPEGNSF 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,626,676
Number of Sequences: 27780
Number of extensions: 209079
Number of successful extensions: 838
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -