Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0268
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   5.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.7  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = +2

Query: 305 QPKRKEEDEYQYTACKAFKQLLQELGDFAGQREVVAENLQSNVVRELHLLAKELREERKQ 484
           QP+++++   +Y   +  +QL Q+      QR VVA + Q    ++ H   ++ R+  K 
Sbjct: 328 QPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQ--QQQHQQQQQKRKRPKP 385

Query: 485 HLNE 496
            L E
Sbjct: 386 ELIE 389


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 549 PGERTNVRRGSRKEH 593
           PG   N+RRGSR  H
Sbjct: 554 PGSPFNLRRGSRGSH 568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,350
Number of Sequences: 2352
Number of extensions: 12970
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)