Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0267
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.3  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   7.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.4  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -2

Query: 412  SCRRGAGILFPTTACHGPHSLRGRDSWTPEGSH 314
            SC R AG  F  T+     S   R S +  GSH
Sbjct: 1330 SCERIAGETFECTSTSSKFSTSSRGSGSDSGSH 1362


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 343 RDSWTPEGSHHTQTT 299
           ++ W PE +HH Q T
Sbjct: 37  KEKWVPEITHHCQKT 51


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 446 ETTSVPASIGFMGFTMSAKGGITLNYGKTFTDCFN 550
           ++T  P SI + G T +    +   +   F DCF+
Sbjct: 479 KSTHTPKSITYKGATSANTNEMCNLFADRFADCFS 513


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 299 GCLSMVASLRSPTISSSE 352
           GCLS + S RS T+S  E
Sbjct: 156 GCLSFIPSKRSITVSWDE 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,976
Number of Sequences: 2352
Number of extensions: 17002
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)