Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0266
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p pro...    33   0.42 
AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA...    33   0.42 
AY094851-1|AAM11204.1|  410|Drosophila melanogaster RE11703p pro...    31   1.3  
AE014296-3353|ABC66162.1|  410|Drosophila melanogaster CG33969-P...    31   1.3  
AE014296-3352|AAF51589.2|  410|Drosophila melanogaster CG33969-P...    31   1.3  
AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA...    29   6.8  

>BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p
           protein.
          Length = 1124

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 242 YSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK 367
           Y LP EV+  I      Q++   +  CK FN + N D +LWK
Sbjct: 311 YELPDEVLLAIFSYLMEQDLCRLALVCKRFNTIAN-DTELWK 351


>AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA
           protein.
          Length = 1182

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 242 YSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWK 367
           Y LP EV+  I      Q++   +  CK FN + N D +LWK
Sbjct: 369 YELPDEVLLAIFSYLMEQDLCRLALVCKRFNTIAN-DTELWK 409


>AY094851-1|AAM11204.1|  410|Drosophila melanogaster RE11703p
           protein.
          Length = 410

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 203 LRKIHIMD-EELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLK 379
           LR +H+   EEL   S    +  + LK++      NF ST + F+  V+ D  +W +   
Sbjct: 256 LRAVHVESGEELVFSSKTMSIYDLKLKDDQVIFTANFDSTFRMFDRRVDRDVAIWDDPF- 314

Query: 380 ELIPDAAFVVVESD 421
               D++F  +E D
Sbjct: 315 ----DSSFYSLEYD 324


>AE014296-3353|ABC66162.1|  410|Drosophila melanogaster CG33969-PB,
           isoform B protein.
          Length = 410

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 203 LRKIHIMD-EELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLK 379
           LR +H+   EEL   S    +  + LK++      NF ST + F+  V+ D  +W +   
Sbjct: 256 LRAVHVESGEELVFSSKTMSIYDLKLKDDQVIFTANFDSTFRMFDRRVDRDVAIWDDPF- 314

Query: 380 ELIPDAAFVVVESD 421
               D++F  +E D
Sbjct: 315 ----DSSFYSLEYD 324


>AE014296-3352|AAF51589.2|  410|Drosophila melanogaster CG33969-PA,
           isoform A protein.
          Length = 410

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 203 LRKIHIMD-EELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLK 379
           LR +H+   EEL   S    +  + LK++      NF ST + F+  V+ D  +W +   
Sbjct: 256 LRAVHVESGEELVFSSKTMSIYDLKLKDDQVIFTANFDSTFRMFDRRVDRDVAIWDDPF- 314

Query: 380 ELIPDAAFVVVESD 421
               D++F  +E D
Sbjct: 315 ----DSSFYSLEYD 324


>AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA
            protein.
          Length = 3489

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 344  NTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYIKNYVFSELKTMSPTHYCK 523
            N D+   +    +      FVV+++D H GD +   KGF + +  +F    TM  T Y +
Sbjct: 3316 NEDEHAIRPSKSDTSLTDGFVVIDNDRHKGDQILR-KGFRWQRQLMFRSKLTMH-TAYDR 3373

Query: 524  RDD 532
            +D+
Sbjct: 3374 KDN 3376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,364,106
Number of Sequences: 53049
Number of extensions: 607329
Number of successful extensions: 1306
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)