Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0261
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4RGA0 Cluster: Chromosome 12 SCAF15104, whole genome s... 35 0.92
UniRef50_UPI0000DC1B24 Cluster: Dynein axonemal heavy chain-like... 34 1.6
UniRef50_UPI00006615E9 Cluster: dynein heavy chain domain 3; n=1... 34 1.6
UniRef50_Q5LKH1 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_O77406 Cluster: TAP1 protein; n=2; Tetrahymena thermoph... 33 3.7
UniRef50_UPI00006A2F06 Cluster: dynein heavy chain domain 3; n=2... 33 4.9
UniRef50_A5DCB4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q7RFC9 Cluster: Ribosome releasing factor-related; n=6;... 32 6.5
UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing ... 32 6.5
UniRef50_UPI00006DC271 Cluster: hypothetical protein CdifQ_04000... 32 8.6
UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep: KI... 32 8.6
UniRef50_Q7RW27 Cluster: Putative uncharacterized protein NCU064... 32 8.6
UniRef50_A7EMQ4 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 32 8.6
>UniRef50_Q4RGA0 Cluster: Chromosome 12 SCAF15104, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF15104, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 4674
Score = 35.1 bits (77), Expect = 0.92
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 66 SYYWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKL 239
S +W FL+ H S SW P+ + V +L++ QP+P+ ++ L + P + IKL
Sbjct: 4134 SGHWVFLANCHLSLSWMPELDKLVEQLQVEQPHPN-FRLWLSSSPHPDFPITILQSGIKL 4192
Query: 240 SMETTESLLKALRTLMSL 293
+ E + + ++ L L
Sbjct: 4193 TTEPPKGVKANMKRLYQL 4210
>UniRef50_UPI0000DC1B24 Cluster: Dynein axonemal heavy chain-like
protein; n=7; Tetrapoda|Rep: Dynein axonemal heavy
chain-like protein - Rattus norvegicus
Length = 3163
Score = 34.3 bits (75), Expect = 1.6
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 63 NSYYWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIK 236
N +W FL+ H S SW P + V +L++ P+PS ++ L + P + IK
Sbjct: 2735 NQGHWVFLANCHLSLSWMPNLDKLVEQLQVEDPHPS-FRLWLSSSPHPDFPISILQASIK 2793
Query: 237 LSMETTESLLKALRTLMSL 293
++ E + L + L L
Sbjct: 2794 MTTEPPKGLKANMTRLYQL 2812
>UniRef50_UPI00006615E9 Cluster: dynein heavy chain domain 3; n=1;
Takifugu rubripes|Rep: dynein heavy chain domain 3 -
Takifugu rubripes
Length = 4407
Score = 34.3 bits (75), Expect = 1.6
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 72 YWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 245
+W FL+ H S SW P+ + V +L++ QP+P ++ L + P + IKL+
Sbjct: 3869 HWVFLANCHLSLSWMPELDKLVEQLQVEQPHPD-FRLWLSSSPHPDFPITILQSGIKLTT 3927
Query: 246 ETTESLLKALRTLMSL 293
E + + ++ L L
Sbjct: 3928 EPPKGVKANMKRLYQL 3943
>UniRef50_Q5LKH1 Cluster: Putative uncharacterized protein; n=1;
Silicibacter pomeroyi|Rep: Putative uncharacterized
protein - Silicibacter pomeroyi
Length = 642
Score = 33.5 bits (73), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 230 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 328
D+ + GD+G + ++N DE EGD+ E DG
Sbjct: 326 DEDDEGDEGDEGDESQNGDEGDEGDEGDELNDG 358
>UniRef50_O77406 Cluster: TAP1 protein; n=2; Tetrahymena
thermophila|Rep: TAP1 protein - Tetrahymena thermophila
Length = 334
Score = 33.1 bits (72), Expect = 3.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 230 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 328
D E GDD + AE+ D++ +GD N++ DG
Sbjct: 248 DDNEDGDDAEDGDDAEDGDDAEDGDDNEDAEDG 280
Score = 32.7 bits (71), Expect = 4.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 230 DQVEHGDDGIAAEGAENADESTEGDQNQENPD 325
D E GDD + AE+ D++ +GD N++ D
Sbjct: 281 DDAEDGDDAEDGDDAEDGDDNEDGDDNEDGDD 312
>UniRef50_UPI00006A2F06 Cluster: dynein heavy chain domain 3; n=2;
Xenopus tropicalis|Rep: dynein heavy chain domain 3 -
Xenopus tropicalis
Length = 4253
Score = 32.7 bits (71), Expect = 4.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 72 YWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 245
+W FL+ H S SW P+ + V +L++ P+P+ ++ L + P + IK++
Sbjct: 3722 HWVFLANCHLSLSWMPQLDKLVEQLQIEDPHPN-FRLWLSSSPHPDFPISILQASIKMTT 3780
Query: 246 ETTESLLKALRTLMSL 293
E + L + L L
Sbjct: 3781 EPPKGLRANMTRLYQL 3796
>UniRef50_A5DCB4 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 634
Score = 32.7 bits (71), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 230 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 328
++VE G++G E E DE+ EG+ N++ +G
Sbjct: 79 EEVEEGEEGEEIEEGEEGDENDEGEGNEQGEEG 111
>UniRef50_Q7RFC9 Cluster: Ribosome releasing factor-related; n=6;
Plasmodium (Vinckeia)|Rep: Ribosome releasing
factor-related - Plasmodium yoelii yoelii
Length = 413
Score = 32.3 bits (70), Expect = 6.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 215 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQE 316
NN DQVE+GD+ E E+ +E D+N+E
Sbjct: 197 NNSTHDQVENGDEDEDGEENEDENEDENEDENEE 230
>UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing
protein 1; n=4; Saccharomycetales|Rep: Multiple
RNA-binding domain-containing protein 1 - Candida
albicans (Yeast)
Length = 841
Score = 32.3 bits (70), Expect = 6.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 374 KLLVENLPSSYLFDYQEKLKELFSKHGEINTVK 472
+L+V+ LP Y +EKL+E FSK G++ VK
Sbjct: 3 RLIVKGLPKYYT---EEKLREFFSKQGDVTDVK 32
>UniRef50_UPI00006DC271 Cluster: hypothetical protein
CdifQ_04000274; n=1; Clostridium difficile
QCD-32g58|Rep: hypothetical protein CdifQ_04000274 -
Clostridium difficile QCD-32g58
Length = 410
Score = 31.9 bits (69), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 395 PSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTEL 499
PS Y F Y+E++K ++ + +K GP+ V L
Sbjct: 227 PSKYCFQYEEEIKSIYQNITQAFDIKNGPLYVQML 261
>UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep:
KIAA0682-like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 927
Score = 31.9 bits (69), Expect = 8.6
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 371 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTV 469
G+L + N+P + +E LKELFSKHG ++ V
Sbjct: 399 GRLFIRNMPYTCT---EEDLKELFSKHGPLSEV 428
>UniRef50_Q7RW27 Cluster: Putative uncharacterized protein
NCU06405.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU06405.1 - Neurospora crassa
Length = 332
Score = 31.9 bits (69), Expect = 8.6
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +3
Query: 117 PKRKVAELKLRQPNPSPLKMSLKKQKFQN-KPKRTMAYRI---KLSMETTESLLKALRTL 284
PKR VA+ +QP PSP++ SL K KF + KR M K++ +T ++ KAL
Sbjct: 178 PKRAVAQAA-QQPQPSPIQPSLVKTKFPTARIKRIMQADEEVGKVAQQTPIAVGKALELF 236
Query: 285 M 287
M
Sbjct: 237 M 237
>UniRef50_A7EMQ4 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Sclerotinia sclerotiorum 1980
Length = 80
Score = 31.9 bits (69), Expect = 8.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 221 GVSDQVEHGDDGIAAEGAENADESTEGDQNQENPDG 328
G+ ++ + GD+G + + DE EGD+ E +G
Sbjct: 25 GMGEEGDEGDEGDEGDEGDEGDEGDEGDEGDEGDEG 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,190,128
Number of Sequences: 1657284
Number of extensions: 5598060
Number of successful extensions: 18860
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18797
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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