Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0261
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.     32   1.0  
AK128517-1|BAC87476.1|  901|Homo sapiens protein ( Homo sapiens ...    31   1.7  
AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens ...    30   5.3  

>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
          Length = 4464

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +3

Query: 72   YWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 245
            +W FL+  H S SW P   + V +L++  P+PS  ++ L      + P   +   IK++ 
Sbjct: 3926 HWVFLANCHLSLSWMPNLDKLVEQLQVEDPHPS-FRLWLSSIPHPDFPISILQVSIKMTT 3984

Query: 246  ETTESLLKALRTLMSL 293
            E  + L   +  L  L
Sbjct: 3985 EPPKGLKANMTRLYQL 4000


>AK128517-1|BAC87476.1|  901|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46675 fis, clone TRACH3009701, weakly  similar to Homo
            sapiens dynein, axonemal, heavy polypeptide 9 (DNAH9). ).
          Length = 901

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 72   YWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 245
            +W FL+  H S SW P   + V +L++  P+PS  ++ L      + P   +   IK++ 
Sbjct: 827  HWVFLANCHLSLSWMPNLDKLVEQLQVEDPHPS-FRLWLSSIPHPDFPISILQVSIKMTT 885

Query: 246  ETTESL 263
            E  + L
Sbjct: 886  EPPKGL 891


>AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45338 fis, clone BRHIP3008082. ).
          Length = 1091

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 215 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQENP 322
           N G S +V H DD  + E  E+ D+  + D  +E P
Sbjct: 72  NTGSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERP 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,965,854
Number of Sequences: 237096
Number of extensions: 872183
Number of successful extensions: 2567
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2567
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)