Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0256
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 64 6e-11
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 62 2e-10
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 62 3e-10
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 35 0.032
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 35 0.032
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 32 0.22
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.39
01_06_0496 - 29795490-29796638,29796811-29796870,29798168-297983... 31 0.51
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 29 2.1
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 29 2.1
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 29 2.7
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 2.7
01_03_0071 + 12203227-12203368,12203551-12203703,12204622-122046... 29 2.7
01_02_0128 + 11407888-11408241 29 2.7
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 28 3.6
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 4.8
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 28 4.8
07_01_0180 + 1266975-1267550 28 4.8
02_03_0380 + 18335903-18337837 28 4.8
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 27 6.3
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 27 6.3
01_06_1560 + 38251268-38251471,38251567-38251672,38251992-382522... 27 6.3
11_03_0130 - 10474607-10475994,10479609-10479706,10479878-104800... 27 8.4
09_02_0462 + 9583558-9584910 27 8.4
08_02_0093 + 12269953-12270507 27 8.4
04_01_0256 + 3402982-3402984,3403077-3403158,3403307-3403449,340... 27 8.4
03_05_1076 + 30180923-30181150,30181746-30181913,30182063-301822... 27 8.4
03_02_0961 + 12759701-12760054,12760294-12760420,12760719-127611... 27 8.4
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 27 8.4
02_02_0378 + 9561775-9562947 27 8.4
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126... 27 8.4
01_06_1810 - 40049677-40049951,40050032-40050112,40050201-400503... 27 8.4
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 64.1 bits (149), Expect = 6e-11
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Frame = +3
Query: 180 RMHVFKNAGK---DVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTDE 326
R+ V +N K D +E RRRR + VE+RK++REE+L K+R VP S +T
Sbjct: 8 RVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATG- 66
Query: 327 EEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILP 497
+DK L + L ++ + +N QL A Q RKLLS +++PPI+E+I +G++P
Sbjct: 67 --VDKKLES--LPAMIGGVYSDDN-NLQLEATTQFRKLLSIERSPPIEEVIQSGVVP 118
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 62.1 bits (144), Expect = 2e-10
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +3
Query: 201 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDE---EEIDKNLATTDLDEL 371
A D E RRRR ++TV LRK R+ L+++R P + + E + + L+ L
Sbjct: 18 ASMDAAEGRRRREDITVILRKADRDRALKEKRRRPTATAAAEGLPQAAHSSAIEKKLESL 77
Query: 372 VMNAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILP 497
M +++ QL + Q RKLLS D PPIDE+I +G+LP
Sbjct: 78 PMMVQGLYSDDSSMQLESTTQFRKLLSVDHCPPIDEVIRSGVLP 121
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 61.7 bits (143), Expect = 3e-10
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Frame = +3
Query: 162 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRN--VPISYSTDEEEI 335
+++A+ R +K A D DE RRRR + VE+RK++REE+L K+R +P + +
Sbjct: 6 SERAEVRRSRYKVA-VDADEGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAAAAAS 64
Query: 336 DKNLATTDLDE------LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILP 497
++ L + ++ A +++ QL A Q RKLLS +++PPI+E+I G++P
Sbjct: 65 PLLAHSSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVP 124
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 35.1 bits (77), Expect = 0.032
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 315 STDEEEIDKNLATTDLDEL--VMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAG 488
S E + A ++L+ L ++ +++ +QL A Q R+LLS +KNP + ++I A
Sbjct: 95 SPPAESVPPTAADSELEGLSEMVEKVWSDDTTSQLEATIQFRRLLSDEKNPTVIKIIRAD 154
Query: 489 ILP 497
+LP
Sbjct: 155 VLP 157
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 180 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 296
R+ +K G DV RRRR + + +R++ R+ L KRR
Sbjct: 14 RLAAYK-PGVDVARSRRRREDRLLAVRRSNRDAGLFKRR 51
>01_01_0334 -
2698347-2699020,2699321-2699477,2699576-2699647,
2699697-2700641,2701183-2701259,2701908-2702064
Length = 693
Score = 35.1 bits (77), Expect = 0.032
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 201 AGKDVDEMRRRRNEVTVELRKNKRE----ETLQKRRNVPISYSTDEEEIDKNLATTDLDE 368
A + V++ RR +T L K + Q +R + S ST + +D T L
Sbjct: 240 AKRPVNQGFRRSRSLTESLEKYSHLLDSISSNQSKRTLTSSKSTRDHSLDAPAVMTGLQS 299
Query: 369 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 476
LVM A N PE LA R ++ D + +DE+
Sbjct: 300 LVMTAENLVIPEHALAPYVPERIIVDGDVDAAMDEI 335
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = +3
Query: 132 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 311
+E A + +A + + + + A +EM+ +R T + ++ K+++ QK+ N +
Sbjct: 442 IEVAYQEAVALKRQEELIREEEEAWLLENEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVK 501
Query: 312 YSTDEEEIDKNLATTDLDE 368
EE+ D N DE
Sbjct: 502 DKDREEKCDSNFPERSQDE 520
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 237 NEVTVELRKNKREETLQKRRNVPISYSTDEEEID 338
+EV ++ RK+ + E +K+R+V SYS+ + E++
Sbjct: 418 SEVDIDTRKHPKREHRKKKRDVTESYSSSDSEVE 451
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 126 YCVETASTDKMATDQAKNRMHVFKNAGKDVDE-MRRRRNEVTVELRKNKREETLQKRRNV 302
YC +++ + A +A+ K+ K + E + + EV + R++++ E +K+RN+
Sbjct: 352 YCSDSSFSG--AEVEARKSKQKSKHKKKHLPESLSDSKVEVGRDTRRHQKREHRKKKRNI 409
Query: 303 PISYSTDEEEID 338
S S+ + E+D
Sbjct: 410 TESESSSDSEVD 421
>01_06_0496 -
29795490-29796638,29796811-29796870,29798168-29798371,
29798739-29798984,29799375-29799464
Length = 582
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +3
Query: 156 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 335
M T+ AK + +V K++ VD + ++++N R+ + +VP S ++ E++
Sbjct: 259 METESAKLKRNVRKSSAVTVDSFQTNMTVEPEKIKRNSRKFSSSAADSVPDSQLSELEKV 318
Query: 336 DKNL 347
+NL
Sbjct: 319 KRNL 322
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 156 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 335
M T+ K + + +++ V+ + T + R+N R+ T +VP S T+ E++
Sbjct: 273 METESGKLKRNSRRSSAAPVESSQTNIAMETEKSRRNPRKFTSSTADSVPESQLTELEKV 332
Query: 336 DKNLATTDLDELVMNAANAENPEAQLAAVQ--QCRK 437
+NL + + A+ P ++ Q QC K
Sbjct: 333 KRNL--RKVTNSMAEASKVSTPATEIPERQEVQCEK 366
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 KNAGKDVDEMRRRRNE----VTVELRKNKREETLQKRRNVPISYSTDEEE 332
KN GK+ +E + R+ +ELR + E+ ++ + P++ + EEE
Sbjct: 4 KNQGKEEEEKQYRKERDVLWTRIELRDREEEKNTGRQEHAPLNLTAREEE 53
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +3
Query: 240 EVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAA 419
+V E RK K EE+ VP + EE I K TD +EL+ N + E +
Sbjct: 183 KVENEERKQKDEES----NGVPKVNISPEEAIAKLAKDTD-NELI--EINKQLEELRQMV 235
Query: 420 VQQCRKLLSCDK 455
VQ+CRK+ + +K
Sbjct: 236 VQKCRKMTTYEK 247
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 198 NAGKDVDEMRRRRNEVTVELRKNKREE---TLQKRRNVPISYSTDEEEIDKNLATTDLDE 368
N K + +R+R K ++ T K+RN + Y TDE+E D + +D +E
Sbjct: 414 NIRKGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE 473
>01_03_0071 +
12203227-12203368,12203551-12203703,12204622-12204683,
12204749-12204830,12206029-12206126,12206240-12206657,
12206793-12206915,12207159-12207178
Length = 365
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 234 RNEVTVELRKNKRE--ETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEA 407
RN V+ L+K K + QK + +PI +T+ I + L + +MN ++ +
Sbjct: 171 RNTVSSYLQKYKAYLLKQEQKDQQLPIDDNTNTSSIKSQQGSASLQQQIMNYGENDSMDN 230
Query: 408 QLAAVQQCRKLLSCDKNPPI 467
Q + Q R +K P +
Sbjct: 231 QSIILSQTRYNEHSNKQPKL 250
>01_02_0128 + 11407888-11408241
Length = 117
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 496 GSIPAAMSSSIGGFLSHESSFLHC 425
G + + S + GGF+SH+ S HC
Sbjct: 76 GGVSSTESRARGGFISHDMSLCHC 99
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 28.3 bits (60), Expect = 3.6
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +3
Query: 165 DQAKNRMHVFKNAGKDVDEMRRRRNEV-----TVELRKNKREETLQKRRNVPISYSTDE- 326
D A R + + K+ E RR++ T +LRK R+ LQKRR+ I DE
Sbjct: 195 DAANTRKLMERQLSKEEQEEITRRSQAMDKNDTSDLRKFSRQAYLQKRRDKKIDEIRDEI 254
Query: 327 ---EEIDKNLATTDLDE 368
E I +++ T+ +E
Sbjct: 255 LDHEYIFQDVKLTEAEE 271
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 216 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKN 344
+E RRR+ + + R ++ LQK++ + S DEEE++ N
Sbjct: 443 EEARRRKEAIMAKYR----QQQLQKQQLESLPRSNDEEEVEMN 481
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 153 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 332
++ TD+ K + + K+ +DE+ +R NE + +KN++ + + + I D EE
Sbjct: 635 RVKTDKDKLKKDIQKSKFLSIDEVFKRLNE---QKKKNEKPDLISLFEDQKI-MKQDLEE 690
Query: 333 IDKNLATTDLDE 368
I K L +L E
Sbjct: 691 IRKRLYMLELKE 702
>07_01_0180 + 1266975-1267550
Length = 191
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 204 GKDVDEMRRRRNEVTVELRKNKREETLQKRRNV-PISYSTDEEEIDKNLATTDLDELVMN 380
G+D +E RRRR + R++ R ++R+ V + + DE ++ + LD
Sbjct: 67 GEDGEEERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDATARR 126
Query: 381 AANAENPEAQ 410
A A+
Sbjct: 127 ALAVRGANAR 136
>02_03_0380 + 18335903-18337837
Length = 644
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 285 QKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 386
Q++R P+ Y T EEI A LDEL A
Sbjct: 420 QQKREFPLGYKTFGEEIPPQYAIQVLDELTKGEA 453
>03_05_0432 - 24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 27.5 bits (58), Expect = 6.3
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 189 VFKNAGKDVDEMRRRRNEVTVELRKNKREETLQ-KRRNVPISYSTDEEEIDKNLATTDLD 365
+ ++ G++V ++R RN + E ++ K EE LQ +R + TDE + +D
Sbjct: 760 LLEHFGQEVADLRSERNTLKQE-QQAKSEELLQLQREKQELVNITDEFWEEVETRNRKVD 818
Query: 366 ELVMNAANAENPEAQLAAVQQCRKLLSCD 452
EL A A+ QL+ +Q R+ L +
Sbjct: 819 EL---RAEAKFLVGQLSELQGSRRSLQSE 844
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 228 RRRNEVTVELRKNKREETLQKRRNVPISYSTDEE--EIDKNLATTDLDELVMNAANAENP 401
R +N+ L+ N+R + + N+ S TD + EID + ++ +E + +
Sbjct: 191 RLQNQENDSLQTNQRSQQELAQENINASSPTDVDNVEIDDDYNSSLGEEPKDDEHTIDED 250
Query: 402 EAQLAAVQQCRKL--LSCDKNPPIDELI 479
EAQ+ ++ +L L + + P+D+++
Sbjct: 251 EAQITEAERNEELAALQAEADLPLDDIL 278
>01_06_1560 +
38251268-38251471,38251567-38251672,38251992-38252203,
38252306-38252512,38253327-38254694
Length = 698
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = -3
Query: 281 CFLSFVFS*LDCDF------IPSPAHFID-IFACILEHMHAVF 174
C L FVF LDC F +PS I + ACI +H HA F
Sbjct: 147 CRLDFVF--LDCTFSKCFLKLPSKESAIQQVIACIWKHPHAPF 187
>11_03_0130 -
10474607-10475994,10479609-10479706,10479878-10480047,
10480382-10480465,10481359-10482009,10482016-10482084
Length = 819
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 466 IGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSIS 329
I G+L + FL C + CA + AA + SSS VV F+ +S
Sbjct: 488 IKGYLGDRARFLAGCDSPACAVAATNEAAALASSSDHVVL-FMGLS 532
>09_02_0462 + 9583558-9584910
Length = 450
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 111 CVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNE 242
C + + DK+ T KN K AGKD MRR E
Sbjct: 123 CAACGFVSDVDMRDKLTTFILKNPPEQKKGAGKDKKAMRRAEKE 166
>08_02_0093 + 12269953-12270507
Length = 184
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 225 RRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLAT----TDLDELVMNAANA 392
++ + E VE +KN+R + ++ +V + E D NL D +++V NA
Sbjct: 99 QKLQQENEVEKKKNQRGQDVRLASDVNALGLHELEAFDSNLNVIDDIVDSNDVVKNAKQT 158
Query: 393 ENPEAQLAAVQQCRKLL 443
P+ Q++ + +L
Sbjct: 159 AEPQTQMSVASTLQFML 175
>04_01_0256 +
3402982-3402984,3403077-3403158,3403307-3403449,
3403557-3403832,3404136-3404315
Length = 227
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 150 DKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREE 278
+ + D K + +K KD++ M+R++ ++ ++LR+ KREE
Sbjct: 72 ESVIPDDVKEEIERYK---KDLERMKRQKEDLDIKLRE-KREE 110
>03_05_1076 +
30180923-30181150,30181746-30181913,30182063-30182281,
30182827-30182872,30183708-30183943,30184065-30184079,
30185749-30186061,30186189-30186403,30186598-30186600
Length = 480
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 198 NAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 332
+AG D E RRRR + ++K E ++RR Y +D EE
Sbjct: 321 SAGSDSSEDRRRRKK-RGRKGRDKEERRDRRRRRRRSKYGSDSEE 364
>03_02_0961 +
12759701-12760054,12760294-12760420,12760719-12761167,
12761369-12761590,12761672-12761980,12762092-12762430,
12762504-12762584,12762661-12762756,12762846-12763220,
12763400-12763531,12763962-12764132
Length = 884
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 252 ELRKNKREETLQKRRNVPISYSTDEEEIDK 341
E K KREE L++R++ + + E +DK
Sbjct: 754 ENAKRKREEALKRRKDAKLKHVIISEHVDK 783
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 165 DQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETL 284
+Q K ++DEM+RR N + EL+ K+++ L
Sbjct: 1363 NQRKETERTLARQRLEIDEMKRRHNTLYDELQDTKKQKLL 1402
>02_02_0378 + 9561775-9562947
Length = 390
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 215 DIFACILEHMHAVFRLISRHFICARCLDTVR 123
++ CI H+HA ++ H +C D +R
Sbjct: 10 ELLPCIAGHLHAAVDVVRFHAVCREWRDALR 40
>01_07_0238 +
42209407-42209964,42210039-42210561,42212577-42212665,
42212981-42213191,42213265-42213446,42213573-42213812,
42214691-42214878,42215230-42215323,42215407-42215463,
42215552-42215686,42216460-42216525,42216745-42216858,
42217849-42218010,42218093-42218221,42218323-42218424,
42219428-42219504,42219600-42219957
Length = 1094
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 99 SLFLCVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVEL 257
+LFL ++ + +E +++ + N + G DVDE + ++ + +EL
Sbjct: 618 NLFLSLVKRFGLEDTQSEQENIECQTNEVDKKDEEGTDVDEEKNKKRSLVMEL 670
>01_06_1810 -
40049677-40049951,40050032-40050112,40050201-40050371,
40050434-40050497,40050689-40050777,40051244-40051378,
40051464-40051515
Length = 288
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 273 EETLQKRRNVPISYSTDEEEIDKNLATTDLDE-LVMNAANAENPEAQLAAVQQCRKLLSC 449
+ETLQ +R + + +D E+D +A L E L +N +E + QC LL+C
Sbjct: 73 KETLQAKRRRMLQFCSDNVEMDCAMAADGLSENLQLNLGFSE-----MTPGDQC--LLNC 125
Query: 450 DKNPPIDE 473
D + E
Sbjct: 126 DGTEELPE 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,329,958
Number of Sequences: 37544
Number of extensions: 268001
Number of successful extensions: 855
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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