Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0254
         (364 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457334-1|CAG33615.1|  351|Homo sapiens FLJ21103 protein.             28   7.8  
BC001647-1|AAH01647.1|  351|Homo sapiens family with sequence si...    28   7.8  
BC001340-1|AAH01340.1|  351|Homo sapiens family with sequence si...    28   7.8  
AK024756-1|BAB14987.1|  351|Homo sapiens protein ( Homo sapiens ...    28   7.8  

>CR457334-1|CAG33615.1|  351|Homo sapiens FLJ21103 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 GFINDGQRPNKRLRKY*PEIAT*LLRKL 347
           GF NDG+ P K+ RK  P + T   R+L
Sbjct: 16  GFFNDGEPPTKKPRKLLPSLKTKKPREL 43


>BC001647-1|AAH01647.1|  351|Homo sapiens family with sequence
           similarity 118, member B protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 GFINDGQRPNKRLRKY*PEIAT*LLRKL 347
           GF NDG+ P K+ RK  P + T   R+L
Sbjct: 16  GFFNDGEPPTKKPRKLLPSLKTKKPREL 43


>BC001340-1|AAH01340.1|  351|Homo sapiens family with sequence
           similarity 118, member B protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 GFINDGQRPNKRLRKY*PEIAT*LLRKL 347
           GF NDG+ P K+ RK  P + T   R+L
Sbjct: 16  GFFNDGEPPTKKPRKLLPSLKTKKPREL 43


>AK024756-1|BAB14987.1|  351|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21103 fis, clone CAS04883. ).
          Length = 351

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 GFINDGQRPNKRLRKY*PEIAT*LLRKL 347
           GF NDG+ P K+ RK  P + T   R+L
Sbjct: 16  GFFNDGEPPTKKPRKLLPSLKTKKPREL 43


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,500,658
Number of Sequences: 237096
Number of extensions: 247302
Number of successful extensions: 536
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)