Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0253
         (305 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   3.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   5.1  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   6.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   6.7  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 224 HVEQTIDNRAPRTYNTQRTDPSVSNVPSI 138
           H+    D  AP TYN     P+  +V S+
Sbjct: 499 HIYTPEDLFAPNTYNRHLVAPNGDHVISL 527


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 255 FMIDTRVTHSSR 220
           F IDTR THS +
Sbjct: 7   FTIDTRSTHSMK 18


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 269 LRQEAETLKNAI 304
           LRQE ETLK+ +
Sbjct: 349 LRQEQETLKSQV 360


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 66  QNVPKSGYPI 95
           QN P +GYP+
Sbjct: 90  QNTPPAGYPM 99


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 66  QNVPKSGYPI 95
           QN P +GYP+
Sbjct: 90  QNTPPAGYPM 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,502
Number of Sequences: 336
Number of extensions: 1392
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)