Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0253
         (305 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   2.6  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   3.4  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   3.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   4.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   4.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   4.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   6.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   6.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   6.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   7.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 183 QHATHRSFCQQCPFDRRSSDF 121
           +H      C+ CP   +SSD+
Sbjct: 271 KHEAGSHSCEACPAHSKSSDY 291


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 143 KGHC*QKDRCVACCTCAARGCRSSVPRELCV 235
           +G C   +    C     R C + VP+ LC+
Sbjct: 34  RGKCPSNEIFSRCDGRCQRFCPNVVPKPLCI 64


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 143 KGHC*QKDRCVACCTCAARGCRSSVPRELCV 235
           +G C   +    C     R C + VP+ LC+
Sbjct: 34  RGKCPSNEIFSRCDGRCQRFCPNVVPKPLCI 64


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 89  ITTFWHILYLFNITTLKQGY 30
           ITT W   Y+++    +Q Y
Sbjct: 168 ITTPWDYYYIYHTLVAEQSY 187


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 89  ITTFWHILYLFNITTLKQGY 30
           ITT W   Y+++    +Q Y
Sbjct: 183 ITTPWDYYYIYHTLVAEQSY 202


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 89  ITTFWHILYLFNITTLKQGY 30
           ITT W   Y+++    +Q Y
Sbjct: 71  ITTPWDYYYIYHTLVAEQSY 90


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -3

Query: 150 CPFDRRSSDFRAISISPLRLDNHFLAHFVSFQYH 49
           CP        R +   P R     LA+F+ F Y+
Sbjct: 261 CPTRNVKEMIRCLRYRPARAIVETLANFMRFYYN 294


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -3

Query: 150 CPFDRRSSDFRAISISPLRLDNHFLAHFVSFQYH 49
           CP        R +   P R     LA+F+ F Y+
Sbjct: 132 CPTRNVKEMIRCLRYRPARAIVETLANFMRFYYN 165


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = -3

Query: 150 CPFDRRSSDFRAISISPLRLDNHFLAHFVSFQYH 49
           CP        R +   P R     LA+F+ F Y+
Sbjct: 261 CPTRNVKEMIRCLRYRPARAIVETLANFMRFYYN 294


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 83  TFWHILYLFNITTLKQ 36
           TF  I+Y FN+   KQ
Sbjct: 529 TFKAIIYGFNVNATKQ 544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,600
Number of Sequences: 438
Number of extensions: 1466
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)