Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0251
         (575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1JT42 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI000023F45A Cluster: hypothetical protein FG03215.1; ...    32   8.4  
UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n...    32   8.4  

>UniRef50_Q1JT42 Cluster: Putative uncharacterized protein; n=1;
           Toxoplasma gondii RH|Rep: Putative uncharacterized
           protein - Toxoplasma gondii RH
          Length = 411

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
 Frame = +1

Query: 13  TSELLIFFFSPPSTNL----LFYNVFIGLIVLRSCA--SVRGVALFVLLSVYLLVI 162
           T  LLIF FSP + +L    +   VFIG+I + S +  S  GV L+++L   LL++
Sbjct: 112 TGVLLIFAFSPVNADLGITSMLLGVFIGIIGILSVSAKSKTGVQLYLVLGTVLLLL 167


>UniRef50_UPI000023F45A Cluster: hypothetical protein FG03215.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG03215.1 - Gibberella zeae PH-1
          Length = 338

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 435 FRALVHPES-ARWRGDKVAYMPVALGSLGGEGEYRDYGHHLSPDHT 569
           FR  +HP    RWR D   YM +A+  L G      Y  +L+PDHT
Sbjct: 31  FRCHIHPTCHRRWRIDDF-YMTIAILPLIGRALCILYSFYLNPDHT 75


>UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000DBFFED UniRef100 entry -
           Rattus norvegicus
          Length = 280

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -3

Query: 408 HAYYALLVSYTALKTFSSTVFSFKHLLIYLHTPFF*VYSH 289
           H  Y  + ++  + T + T++ + H+ IY HT    +Y+H
Sbjct: 180 HTQYIYIYTHIYIYTHTHTIYIYTHIYIYTHTHNIYIYTH 219


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,626,454
Number of Sequences: 1657284
Number of extensions: 7790906
Number of successful extensions: 21679
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21663
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)