Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0251
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022719-1|AAY55135.1|  531|Drosophila melanogaster RE74626p pro...    29   6.0  
AE014135-88|AAN06496.1|  759|Drosophila melanogaster CG11533-PB,...    29   6.0  
AE014135-87|AAN06495.1|  915|Drosophila melanogaster CG11533-PC,...    29   6.0  
AE014135-86|AAF59340.2| 1014|Drosophila melanogaster CG11533-PA,...    29   6.0  

>BT022719-1|AAY55135.1|  531|Drosophila melanogaster RE74626p
           protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 215 SIGDLTFGARRAAFGSFLITSRYTDNSTNNATPRTLAQLRSTIR 84
           S+G L +  RR     F +  +YT  +     PR  A  R T+R
Sbjct: 144 SVGRLPYNCRRVYMLDFGLARQYTTGTGEVRCPRAAAGFRGTVR 187


>AE014135-88|AAN06496.1|  759|Drosophila melanogaster CG11533-PB,
           isoform B protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 215 SIGDLTFGARRAAFGSFLITSRYTDNSTNNATPRTLAQLRSTIR 84
           S+G L +  RR     F +  +YT  +     PR  A  R T+R
Sbjct: 92  SVGRLPYNCRRVYMLDFGLARQYTTGTGEVRCPRAAAGFRGTVR 135


>AE014135-87|AAN06495.1|  915|Drosophila melanogaster CG11533-PC,
           isoform C protein.
          Length = 915

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 215 SIGDLTFGARRAAFGSFLITSRYTDNSTNNATPRTLAQLRSTIR 84
           S+G L +  RR     F +  +YT  +     PR  A  R T+R
Sbjct: 248 SVGRLPYNCRRVYMLDFGLARQYTTGTGEVRCPRAAAGFRGTVR 291


>AE014135-86|AAF59340.2| 1014|Drosophila melanogaster CG11533-PA,
           isoform A protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 215 SIGDLTFGARRAAFGSFLITSRYTDNSTNNATPRTLAQLRSTIR 84
           S+G L +  RR     F +  +YT  +     PR  A  R T+R
Sbjct: 347 SVGRLPYNCRRVYMLDFGLARQYTTGTGEVRCPRAAAGFRGTVR 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,265,550
Number of Sequences: 53049
Number of extensions: 352656
Number of successful extensions: 815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)