Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0250
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    33   0.006
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    27   0.74 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.3  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.2  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   6.9  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.1  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    23   9.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.1  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 22/89 (24%), Positives = 40/89 (44%)
 Frame = +2

Query: 122  RERATRCASEKELYDKIRKSVRSGNVAKPRSKGAERQRRAPTSFTKGSGGGCGAKRRAGS 301
            RE+  + A  +E Y++I++ ++   + +P      R   + T  +   G    AK+RAG+
Sbjct: 897  REKQDQLARMREHYEQIQRELKD-KLKRPTPFERMRSFFSRTKPSPAGGKAAAAKQRAGN 955

Query: 302  PCEGGGKVARWEDSIARLEAVAAGAGGGD 388
               GG       D    ++   AG GG +
Sbjct: 956  GSAGGASDPPGADVCDEIKFSMAGGGGSN 984


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 266 GGGCGAKRRAGSPCEGGGK 322
           G GCG + R   PC+ G K
Sbjct: 18  GAGCGCESRCTCPCKDGAK 36


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 260 GSGGGCGAKRRAGSPCEGGG 319
           GS GG G    +GSP  GGG
Sbjct: 687 GSSGGSGGGLASGSPYGGGG 706


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 19/71 (26%), Positives = 23/71 (32%)
 Frame = +2

Query: 173 RKSVRSGNVAKPRSKGAERQRRAPTSFTKGSGGGCGAKRRAGSPCEGGGKVARWEDSIAR 352
           R  + SGNV+       +     P       GGG G     G    G G   R       
Sbjct: 517 RLRISSGNVSSEIPTVIQNDPNGPVGPAGVGGGGGGGGGGGGGGVIGSGSTTRLPPLHQP 576

Query: 353 LEAVAAGAGGG 385
              +A  AGGG
Sbjct: 577 FPMLANHAGGG 587


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +2

Query: 260 GSGGGCGAKRRAGSPCEGGGKVARWEDSIARLEAVAAGAGGG 385
           G GGG       G    GGG+     D     E    G GGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGG 254



 Score = 23.8 bits (49), Expect = 5.2
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
 Frame = +2

Query: 215  KGAERQRRAPTSFTKGSGGG------CGAKRRAGSPCEGGGKVARWEDSIARLEAVAA 370
            K  E+     ++   GSGGG       G+   AGSP E  G   R   SI    A AA
Sbjct: 1117 KHHEKAATVNSNGNAGSGGGQANQAAAGSDGGAGSPAELSGNRERRSPSIPNSNAGAA 1174



 Score = 23.4 bits (48), Expect = 6.9
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
 Frame = +2

Query: 212 SKGAERQRRAPTSFTKGSGGGC----GAKRRAGSPCEGGGKVARWEDSIAR-LEAVAAGA 376
           +K A+ +   P +   GSGGG     G       P  GGG   R  D   R  E    G 
Sbjct: 190 AKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGN 249

Query: 377 GGG 385
           GGG
Sbjct: 250 GGG 252


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = +2

Query: 224  ERQRRAPTSFTKGSGGGCGAKRR-AGSPCEGGGKVARWEDSIARLEAVAAGAGGG 385
            ER+R+      K  GGG   KR+       GG   +  E+     +    GA GG
Sbjct: 936  ERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGG 990


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 446 SRRTSACDMRASPP-PRFASSLRHQXXXXXXRVALWSPPSARLCRRPRTGS 297
           +RR+ A   R++P  PR A +            ++WS PS+  C   RT S
Sbjct: 39  TRRSEAVMTRSTPSSPRLAQA----STCPVPCSSIWSRPSSMRCAPARTAS 85


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 158 LYDKIRKSVRSGNVAKPRSKGAERQRR 238
           +YDK+RK++R  + A    KG  +Q R
Sbjct: 358 IYDKVRKAIRL-DAAHSEMKGHIKQGR 383


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 104 IFSF*RRERATRCASEKELYDKIRKSVRSGNVAKPRSKGAERQRR 238
           +F+F R  R  R  +EK   DK+  S++  +   P    AE  RR
Sbjct: 216 MFNFNRNGREARNRAEKNRRDKLNGSIQELSAMVPHV--AESPRR 258


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 609 KAHKFIILKRLS 574
           KAHKFI  KRLS
Sbjct: 153 KAHKFIASKRLS 164


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 239  APTSFTKGSGGGCGAKRRAG 298
            +PT    G GGG G K  AG
Sbjct: 1489 SPTKGAGGGGGGGGGKGAAG 1508


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,121
Number of Sequences: 2352
Number of extensions: 9172
Number of successful extensions: 40
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)