Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0250
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 391 AVSATSAGGHGLES 350
           A + TSAGGHG ++
Sbjct: 12  AAAVTSAGGHGFDA 25


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 391 AVSATSAGGHGLES 350
           A + TSAGGHG ++
Sbjct: 12  AAAVTSAGGHGFDA 25


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 242 PTSFTKGSGGGCGAKRRAGS 301
           PT  T G GG   ++R  GS
Sbjct: 279 PTEVTIGGGGTTSSRRTTGS 298


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 242 PTSFTKGSGGGCGAKRRAGS 301
           PT  T G GG   ++R  GS
Sbjct: 279 PTEVTIGGGGTTSSRRTTGS 298


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 242 PTSFTKGSGGGCGAKRRAGS 301
           PT  T G GG   ++R  GS
Sbjct: 279 PTEVTIGGGGTTSSRRTTGS 298


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 447 QPPHQRLRH 421
           QPPHQ+L H
Sbjct: 808 QPPHQQLHH 816


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,359
Number of Sequences: 438
Number of extensions: 2632
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)