Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0246
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   160   6e-40
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   101   3e-22
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    70   1e-12
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    70   1e-12
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...    52   3e-07
U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical pr...    31   0.35 

>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  160 bits (388), Expect = 6e-40
 Identities = 70/116 (60%), Positives = 97/116 (83%)
 Frame = +3

Query: 3   GTADFLSKMQDGEKSAAPEMNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDAN 182
           GT++FLSK+ D   S+  +  D+IGQFGVGFY+AFLVAD V V +K+NDD Q++W+SD+ 
Sbjct: 158 GTSEFLSKLMDTATSS-DQQQDLIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDSA 216

Query: 183 SFSVAEDPRGDTLKRGTHLTLHMKEEASDYLQADTIRALVKKYSQFINFPIYLWAS 350
           SF++++DPRG+TLKRGT +TL++KEEA+D+L+ DT++ LV KYSQFINF I+LW S
Sbjct: 217 SFTISKDPRGNTLKRGTQITLYLKEEAADFLEPDTLKNLVHKYSQFINFDIFLWQS 272


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  101 bits (242), Expect = 3e-22
 Identities = 52/113 (46%), Positives = 69/113 (61%)
 Frame = +3

Query: 3   GTADFLSKMQDGEKSAAPEMNDMIGQFGVGFYSAFLVADSVTVASKHNDDRQHVWQSDAN 182
           GT  F+  +Q G   +      MIGQFGVGFYSAFLVAD V V SK+NDD  + W+S A 
Sbjct: 102 GTKAFMEALQAGADIS------MIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAG 155

Query: 183 SFSVAEDPRGDTLKRGTHLTLHMKEEASDYLQADTIRALVKKYSQFINFPIYL 341
              V        + RGT + +H+KE+  D+L+   I+ +VKK+SQFI +PI L
Sbjct: 156 GSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIVKKHSQFIGYPIKL 208


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
 Frame = +3

Query: 69  MIGQFGVGFYSAFLVADSVT-----VASKHNDDRQHVWQSDANSFSVAEDPRGDTLKRGT 233
           +IGQFGVGFYSAF+VADSV      V S   D  Q  W  D NS+ +AE      L+ GT
Sbjct: 151 VIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGD-NSYEIAET---SGLQTGT 206

Query: 234 HLTLHMK-EEASDYLQADTIRALVKKYSQFINFPI 335
            + + +K  +++ Y + D I+ ++ KYS F++ PI
Sbjct: 207 KIEIRLKVGDSATYAEEDRIKEVINKYSYFVSAPI 241


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
 Frame = +3

Query: 69  MIGQFGVGFYSAFLVADSVT-----VASKHNDDRQHVWQSDANSFSVAEDPRGDTLKRGT 233
           +IGQFGVGFYSAF+VADSV      V S   D  Q  W  D NS+ +AE      L+ GT
Sbjct: 151 VIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGD-NSYEIAET---SGLQTGT 206

Query: 234 HLTLHMK-EEASDYLQADTIRALVKKYSQFINFPI 335
            + + +K  +++ Y + D I+ ++ KYS F++ PI
Sbjct: 207 KIEIRLKVGDSATYAEEDRIKEVINKYSYFVSAPI 241


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = +3

Query: 69  MIGQFGVGFYSAFLVADSVT-----VASKHNDDRQHVWQSDANSFSVAEDPRGDTLKRGT 233
           +IGQFGVGFYSAF+VADSV      V S   D  Q  W  D NS+ +AE      L+ GT
Sbjct: 151 VIGQFGVGFYSAFMVADSVVVTTRKVGSSDADGLQWTWNGD-NSYEIAET---SGLQTGT 206

Query: 234 HLTLHMK 254
            + + +K
Sbjct: 207 KIEIRLK 213


>U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical
           protein F55F8.3 protein.
          Length = 910

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 346 AHK*MGKLMNCEYFLTSARMVSACK*SLASSFMCSVR 236
           +HK  G ++NC++   S  M++ CK  LA+ + C++R
Sbjct: 188 SHK--GYIVNCQFMKNSYDMITVCKRGLANVWTCNLR 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,965,380
Number of Sequences: 27780
Number of extensions: 80826
Number of successful extensions: 305
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)