Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0242
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.54 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -2

Query: 480  SISTSWKSRQNTMAATRPTLKSYRTFGASCTACRWRTSGSCFS 352
            S +  W+++  T   TRPT    +     C + ++    SC S
Sbjct: 1178 STTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSS 1220



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 595 LQIHSVKNLHINLQIPFCF 651
           L+ H+ K LH++   P C+
Sbjct: 744 LRRHNFKGLHLDWNYPVCW 762


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TTSQNLSSPASSTSSTSSTE 180


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 180


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 180


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 180


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 180


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 83  PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 136


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 180


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
           PP  +   S++ KS  L    S+STS   K A S  +S  + +P  +  +  ST+
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATS-TASQNLSSPASSTSSTSSTE 180


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +3

Query: 438 PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLS-SVTIKNPRRNALNCVSTDTFSK 614
           PP Y      S  S +    + +S++S      S       IK+P   A   VST+   K
Sbjct: 34  PPIYEPSCQYSPVSNSDSENSEVSSNSYTPKIKSCRPFKAYIKDPLTLAQGLVSTEMLLK 93

Query: 615 KSAYKSTNSF 644
           K + ++ N F
Sbjct: 94  KDSSEAFNEF 103


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 405 KSCTILESDA*PPSYSVDFS 464
           +SCT L +++  PS+ + FS
Sbjct: 407 ESCTRLNNESRKPSFVIQFS 426


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 289 RNGPDCDRLPTAHTCFNVLLL 227
           R  P    LPT H C   +LL
Sbjct: 13  RGTPPKFELPTTHNCLKKVLL 33


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 428 GRVAAIVFCRLFQLVEIENLASTNKHF 508
           G V   V C+L Q +    L S  K+F
Sbjct: 257 GNVKIPVLCKLIQSIPTHLLDSEKKNF 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,302
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)