Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0242
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 120 1e-28
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 116 4e-27
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 112 4e-26
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 109 3e-25
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 103 3e-23
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 92 7e-20
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 84 1e-17
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.012
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.11
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.25
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.25
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 29 0.77
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 29 0.77
SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase |Schizosaccharo... 29 0.77
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.0
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 28 1.0
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 27 1.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.4
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 27 2.4
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 3.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 4.1
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 5.5
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 5.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 5.5
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 25 7.2
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 120 bits (290), Expect = 1e-28
Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
Frame = -1
Query: 652 ENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSKV-FD 476
EN+ +++ L +++ LN + Q RAF GF + D L A F E+++LV G V D
Sbjct: 860 ENRLQYIHLVSNYYLNARLSRQCRAFTNGFTQIIDPHWL-AMFHESEIQILVGGDPVPID 918
Query: 475 FHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNL--N 302
+L + T Y GGY +S + FW ++ EDKR ++F T R P+ G L +
Sbjct: 919 IDDLRRHTVYAGGYEPNSPTIVLFWEVLREFEEEDKRSFVKFVTSVARPPILGFKALMPS 978
Query: 301 FVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINYSKGFG 155
F I NG D RLPTA TC N+L LP Y T+ L+D+LL A+ GFG
Sbjct: 979 FCIRVNGEDETRLPTASTCVNLLKLPMYSTKQTLRDKLLTAVRSGVGFG 1027
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 116 bits (278), Expect = 4e-27
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 7/174 (4%)
Frame = -1
Query: 655 QENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSKVFD 476
+ENKK++VDL ++ ++ VE QF AF GF+ + + F E+E+L+ G D
Sbjct: 614 EENKKKYVDLVTEWRVSKRVEQQFNAFYSGFVELVSPDLVNVFDE-RELELLIGGISDVD 672
Query: 475 FHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNLN-- 302
+ + TEY A+D +++ FW I+ ED+ KLLQF TG+ R+PV G +L
Sbjct: 673 VEDWKSHTEYRTYIATDP-VIKWFWEIIAGWKNEDRSKLLQFATGTSRIPVNGFRDLQGS 731
Query: 301 -----FVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINYSKGFG 155
F I + G D+LP AHTCFN L LP+Y ++D L ++L A+ + GFG
Sbjct: 732 DGPRKFTIEKAGTP-DQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAVENTVGFG 784
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 112 bits (270), Expect = 4e-26
Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Frame = -1
Query: 649 NKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSKVFDFH 470
NK+ +V+ D+ L SV+ Q ++ GF + S L F +E+E+L+ G D
Sbjct: 3055 NKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIP-SHLIQIFNEQELELLISGLPEIDID 3113
Query: 469 ELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNLN---- 302
+ + +TEY G Y S VQ FW V S E++ KLLQF TG+ +VP+ G L
Sbjct: 3114 DWKNNTEYHG-YNVSSPQVQWFWRAVRSFDEEERAKLLQFATGTSKVPLNGFKELEGMSG 3172
Query: 301 ---FVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINY-SKGFG 155
F I ++ +RLP +HTCFN L LPEYDT ++L+ LL AIN S+GFG
Sbjct: 3173 FQRFNIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGFG 3225
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 109 bits (263), Expect = 3e-25
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 7/174 (4%)
Frame = -1
Query: 655 QENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSKVFD 476
+ENK+E+VDL + + +E QF AF GF + + + F E+E+L+ G D
Sbjct: 595 EENKREYVDLVTVWRIQKRIEEQFNAFHEGFSELIPQELINVFDE-RELELLIGGISEID 653
Query: 475 FHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNL--- 305
+ +K T+Y Y+ + +I++ FW ++ E K +LLQFTTG+ R+PV G +L
Sbjct: 654 MEDWKKHTDYRS-YSENDQIIKWFWELMDEWSNEKKSRLLQFTTGTSRIPVNGFKDLQGS 712
Query: 304 ----NFVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINYSKGFG 155
F I + G + ++LP AHTCFN L LP Y ++ L +L A+ + GFG
Sbjct: 713 DGPRKFTIEKAG-EPNKLPKAHTCFNRLDLPPYTSKKDLDHKLSIAVEETIGFG 765
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 103 bits (246), Expect = 3e-23
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 26/193 (13%)
Frame = -1
Query: 652 ENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSK-VFD 476
EN+KE+V Y D+LLN +V+ QF AF GF+ V + + + F+ E+ L+ GS+ V D
Sbjct: 615 ENRKEYVLRYVDYLLNTTVKKQFSAFFDGFMKVCGGNAI-SLFQDNEISKLIRGSEEVID 673
Query: 475 FHELEKSTEYD-------------------------GGYASDSKIVQDFWGIVHSLPLED 371
+ L+ YD + S KI+ FW ++ L+
Sbjct: 674 WELLKNVCVYDFYDQNAISNSISESEPSMTASKYLCHSFVSKRKIILWFWDLISHYSLKM 733
Query: 370 KRKLLQFTTGSDRVPVGGLCNLNFVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDR 191
++ L F TGSDR+P G N I+ GPD D+LP +HTCFN L + EY +R+KL+ +
Sbjct: 734 QKLFLIFVTGSDRIPATGAHNFQLRISVLGPDSDQLPISHTCFNHLCIWEYSSREKLKKK 793
Query: 190 LLKAINYSKGFGL 152
L A+ + GF +
Sbjct: 794 LDTALLETNGFNI 806
>SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 671
Score = 91.9 bits (218), Expect = 7e-20
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Frame = -1
Query: 652 ENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSKVFDF 473
+NK ++ + L S E QF A + G + +S L F E++ L+ G + D
Sbjct: 500 QNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVL-QIFNENELDTLLNGKRDIDV 558
Query: 472 HELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNLN--- 302
+ ++ T+Y Y IV FW ++ E K KLLQF TG+ R+P+ G +++
Sbjct: 559 QDWKRFTDYRS-YTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSD 617
Query: 301 ----FVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINYSKGFG 155
F I + G +LP AHTCFN L +P Y+++++L+ +L AI + GFG
Sbjct: 618 GPRKFTIEKVG-HISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAGFG 669
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 84.2 bits (199), Expect = 1e-17
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Frame = -1
Query: 649 NKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSKVFDFH 470
N ++++ D+ + V+ Q AF+ GF V + L E V + + + +
Sbjct: 1473 NVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYA 1532
Query: 469 ELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNLN---F 299
L KS D GY +S +Q ++ + +++R LQF TGS ++P+GG LN
Sbjct: 1533 TLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLT 1592
Query: 298 VIAR-NGPDC---DRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINYSKG 161
V+ R N P D LP+ TC N L LPEY + + L RL KAI +G
Sbjct: 1593 VVRRLNEPPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQG 1642
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 34.7 bits (76), Expect = 0.012
Identities = 28/95 (29%), Positives = 47/95 (49%)
Frame = +3
Query: 357 SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAP 536
SS +SSS + P S + + S + PS SSS+ S T ++S S SS + ++
Sbjct: 322 SSSSMSSSSSFSSSPTSSSSTISSSSSSPS-----SSSFSSTTSSSKSSSSFSSTVSSSS 376
Query: 537 SGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTNS 641
S SS + ++ S+ S S++KS++S
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSS 411
Score = 29.5 bits (63), Expect = 0.44
Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 12/142 (8%)
Frame = +3
Query: 264 SRSQSGPFLAITKFKLHSP--PTGTRSD-----PVVN*SSFRLSSSGKLCTMPQKSCTIL 422
S S S P ++ T S PT T S VV+ SS SSS T S + +
Sbjct: 181 STSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSI 240
Query: 423 ES-DA*PPSYSVDFSSSWKSKTLLPQTS----ISTSSGLKNAPSGLSSVTIKNPRRNALN 587
S + S S SSS S T +S IS+SS ++P+ SS + ++
Sbjct: 241 PSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSP 300
Query: 588 CVSTDTFSKKSAYKSTNSFLFS 653
++ T S S+ S+ S S
Sbjct: 301 TSTSSTISSSSSSSSSFSSTLS 322
Score = 29.1 bits (62), Expect = 0.59
Identities = 25/90 (27%), Positives = 43/90 (47%)
Frame = +3
Query: 372 SSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSS 551
SSS ++ S + S + S + SSS S ++IS+SS ++P+ SS
Sbjct: 246 SSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSS 305
Query: 552 VTIKNPRRNALNCVSTDTFSKKSAYKSTNS 641
TI + ++ + ST + S S+ S +S
Sbjct: 306 -TISSSSSSSSSFSSTLSSSSMSSSSSFSS 334
Score = 27.1 bits (57), Expect = 2.4
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +3
Query: 315 SPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLP 494
S + T S + SS SSS ++ S + S S SSS S T
Sbjct: 245 SSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTS 304
Query: 495 QTSISTSSGLKNAPSGLSSVTIKNPRR-NALNCVSTDTFSKKSAYKSTNSF 644
T S+SS + S LSS ++ + ++ S+ T S S+ S++SF
Sbjct: 305 STISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSF 355
Score = 27.1 bits (57), Expect = 2.4
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Frame = +3
Query: 297 TKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*---PPSYSVDFSS 467
T L S + + + + SS SSS + S TI S + P S S SS
Sbjct: 250 TSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISS 309
Query: 468 SWKSKT----LLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKSAYKST 635
S S + L +S+S+SS ++P+ SS + + + S+ T S+ KS+
Sbjct: 310 SSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTT----SSSKSS 365
Query: 636 NSF 644
+SF
Sbjct: 366 SSF 368
Score = 27.1 bits (57), Expect = 2.4
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Frame = +3
Query: 264 SRSQSGPFLAITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PP 443
S S S + + + S + + S P SS SSS + S TI S +
Sbjct: 257 SSSSSTASSSSSSSSIISSSSSSSSSPTST-SSTISSSSSSSSSPTSTSSTISSSSSSSS 315
Query: 444 SYSVDFSSSWKSK----TLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFS 611
S+S SSS S + P +S ST S ++PS S + + +++ + ST + S
Sbjct: 316 SFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSS 375
Query: 612 KKSAYKSTNS 641
++ + S
Sbjct: 376 SSTSSSTLTS 385
Score = 25.8 bits (54), Expect = 5.5
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +3
Query: 348 VN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVD---FSSSWKSKTLLPQTSISTSS 518
V+ SS LSSS L + S + S + P S FSS+ + T S S+
Sbjct: 157 VSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVV 216
Query: 519 GLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTNS 641
++PS SS T+ + + + ST + S ++ ++S
Sbjct: 217 SSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSS 257
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 31.5 bits (68), Expect = 0.11
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 291 AITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSS 467
+IT + + T S VVN S+ SSS + P S T++ + YSV + S+
Sbjct: 539 SITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSST 598
Query: 468 SWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T+L ++ TSS + N+ + ++S T N
Sbjct: 599 PITSSTVLNSSTPITSSSVLNSSTPITSSTALN 631
Score = 31.5 bits (68), Expect = 0.11
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SS+ + P S T+L S S SV + S+
Sbjct: 3012 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTP 3071
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T L ++ TSS + N+ + ++S +I N
Sbjct: 3072 ITSSTALNTSTPITSSSVLNSSTAITSSSIVN 3103
Score = 30.7 bits (66), Expect = 0.19
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 291 AITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYS-VDFSS 467
AIT + + T S V+N S+ SSS + P S +IL S S + V+ S+
Sbjct: 3095 AITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSST 3154
Query: 468 SWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T L ++ TSS + N+ + ++S +I N
Sbjct: 3155 PITSSTTLNTSTPITSSSVLNSSTAITSSSIVN 3187
Score = 29.9 bits (64), Expect = 0.34
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SSS + P S T+L S S SV + S+
Sbjct: 768 ITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTP 827
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTNS 641
S T++ ++ TSS + N+ + ++S ++ N + + +T + ++ NS
Sbjct: 828 ITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNS 884
Score = 29.5 bits (63), Expect = 0.44
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SS+ + P S T+L S S SV + S+
Sbjct: 1356 ITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTP 1415
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T++ ++ TSS + N+ + ++S T+ N
Sbjct: 1416 ITSSTVVNTSTPITSSTVVNSSTPITSSTVVN 1447
Score = 29.5 bits (63), Expect = 0.44
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SS+ + P S T+L S S SV + S+
Sbjct: 2196 ITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTP 2255
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T++ ++ TSS + N+ + ++S T+ N
Sbjct: 2256 ITSSTVVNTSTPITSSTVVNSSTPITSSTVVN 2287
Score = 29.5 bits (63), Expect = 0.44
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SS+ + P S T+L S S SV + S+
Sbjct: 2484 ITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTP 2543
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T++ ++ TSS + N+ + ++S+T N
Sbjct: 2544 ITSSTVVNTSTPITSSTVVNSSTPITSLTALN 2575
Score = 29.5 bits (63), Expect = 0.44
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SS+ + P S T+L S S SV + S+
Sbjct: 2784 ITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTP 2843
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T L ++ TSS + N+ + ++S T N
Sbjct: 2844 ITSSTALNTSTPITSSSVLNSSTPITSSTALN 2875
Score = 29.1 bits (62), Expect = 0.59
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 291 AITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYS-VDFSS 467
+IT + + T S VVN S+ SSS + P S T++ S S + V+ S+
Sbjct: 1307 SITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTST 1366
Query: 468 SWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T++ ++ TSS + N+ + ++S T+ N
Sbjct: 1367 PITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1399
Score = 28.3 bits (60), Expect = 1.0
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 294 ITKFKLHSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSV-DFSSS 470
IT + + T S VVN S+ SSS + P S T L + S SV + S+
Sbjct: 2436 ITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTP 2495
Query: 471 WKSKTLLPQTSISTSSGLKNAPSGLSSVTIKN 566
S T++ ++ TSS + N+ + ++S T+ N
Sbjct: 2496 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 2527
Score = 25.0 bits (52), Expect = 9.5
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 444 SYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKSA 623
SYS S S S ++ T++ST+SG+ S LSS A + + S+ S+
Sbjct: 3577 SYSRFSSGSLDSSSVFNSTTVSTASGISQG-SVLSSTRAIESESTASH--RSSVLSELSS 3633
Query: 624 YK-STNSF 644
Y ST++F
Sbjct: 3634 YDLSTSAF 3641
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.25
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +3
Query: 357 SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAP 536
SS SSS T P S + S + S S SSS S + +S S+SS ++
Sbjct: 141 SSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 200
Query: 537 SGLSS----VTIKNPRRNALNCVSTDTFSKKSAYKSTNSFL 647
S SS +T ++ + S+ + S S S++SF+
Sbjct: 201 SSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFI 241
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +3
Query: 357 SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAP 536
SS SSS + + T S + S S SSS S + +S S+SS ++
Sbjct: 133 SSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 192
Query: 537 SGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTNS 641
S SS + + +++ S+ + S S+ S++S
Sbjct: 193 SSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSS 227
Score = 27.1 bits (57), Expect = 2.4
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +3
Query: 258 VGSRSQSGPFLAITKFKLHSPPTGTRSDP----VVN*SSFRLSSSGKLCTMPQKSCTILE 425
V S S S + + S T T + P + SS SSS + S +
Sbjct: 127 VSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 186
Query: 426 SDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNA--LNCVST 599
S + S S SSS S + +P TS ++SS ++ S SS + P ++ + +S+
Sbjct: 187 SSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSS 246
Query: 600 DTF 608
TF
Sbjct: 247 STF 249
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.25
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +3
Query: 315 SPPTGTRSD--PVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTL 488
S PT + SD + S +SSS T S + S + P S S+ SSS S T
Sbjct: 544 SIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTF 603
Query: 489 LPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTN 638
++ S SS + S + ++ P ++L S+ S S+ S++
Sbjct: 604 SSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSS 653
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 0.77
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 377 QRQAVHDAPKVLYDFRVGRVAAIVFCRLFQLVE 475
++ A+ +A K+L F RV IVFCR+ + E
Sbjct: 533 KKSAISEASKLLIKFAEKRVRTIVFCRVRKTCE 565
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.7 bits (61), Expect = 0.77
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 501 SISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKS 620
S+ +S+ + + PS S T+KNP N++N + D + S
Sbjct: 902 SLESSNDIDDRPSSTSPSTLKNPSINSINRQTHDVEKESS 941
>SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 28.7 bits (61), Expect = 0.77
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -1
Query: 484 VFDFHELEKSTE-YDGGYASDSKI---VQDFWGIVHSLPLE 374
+ D ELEK E Y + D + V DFWG + +PLE
Sbjct: 158 IADREELEKRVEEYKKKFGEDESVPVPVPDFWGGIRIVPLE 198
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 1.0
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +3
Query: 372 SSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSS 551
SSS + S S + S S+ SSS S + +S T+SGL ++ S +SS
Sbjct: 117 SSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSS 176
Query: 552 VTIKNPRRNALNCVSTDTFSKKSAYKSTNSF 644
P + + VST S+ +TN++
Sbjct: 177 TYRDGP--SIITLVSTSYVSEVVTPTTTNNW 205
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 28.3 bits (60), Expect = 1.0
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +3
Query: 393 TMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPR 572
T+P +SC L+ + + VD S+ K LLP SSG GL ++ K+
Sbjct: 175 TIPSQSCVRLKIN--DKTRKVDASALEKKSCLLPN-----SSGTLTDQRGLDTIKHKSIE 227
Query: 573 RNALNCVSTDTFS 611
+N + V +DT S
Sbjct: 228 QNEILHVISDTLS 240
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 441 PSYSVDFSSSWKSKTLLP 494
P++S+DF++SW +K L P
Sbjct: 542 PAFSIDFAASWLAKILEP 559
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 2.4
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +3
Query: 324 TGTRSDPV--VN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVD--FSSSWKSKTLL 491
T S P+ VN +S +SS L + + T + S A PSY+ +S S T L
Sbjct: 368 TSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTA--PSYNTSSVLPTSSVSSTPL 425
Query: 492 PQTSISTSSGLKNAP-SGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTN 638
+ +T++ + P S ++S T + L+ V++ T + S+ T+
Sbjct: 426 SSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTS 475
Score = 25.4 bits (53), Expect = 7.2
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 462 SSSWKSKTLLPQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCV--STDTFSKKSAYKST 635
SSS S T TS +TSS L + + +S T + ++LN +T T S S+ ++
Sbjct: 161 SSSTNSTTSATPTSSATSSSLSSTAAS-NSATSSSLASSSLNSTTSATATSSSLSSTAAS 219
Query: 636 NS 641
NS
Sbjct: 220 NS 221
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 450 NTMAATRPTLKSYRTFGASCTACRWRTSGSCFSS 349
N +A+T +L SY S C W G CFS+
Sbjct: 431 NVIASTNGSLLSYIDNPVSGITCPWLYVGMCFST 464
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 652 ENKKEFVDLYADFLLNV---SVETQFRAFRRGFLMVTDESPLG--AFFRPEEVEMLVCGS 488
EN E V L A F+ NV S+ + ++ + L++T +P FF P E+L +
Sbjct: 1034 ENVDESVGLNAMFMDNVNQDSLNSVDQSSGKDKLLLTSSTPNKPTTFFMPANEEILGSPA 1093
Query: 487 KVFDFHE 467
K +D H+
Sbjct: 1094 KDYDIHD 1100
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 4.1
Identities = 28/110 (25%), Positives = 43/110 (39%)
Frame = +3
Query: 312 HSPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLL 491
+S P T S +S + + P T S + PP SS+ S + L
Sbjct: 274 NSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPP-PASTSSTGTSSSPL 332
Query: 492 PQTSISTSSGLKNAPSGLSSVTIKNPRRNALNCVSTDTFSKKSAYKSTNS 641
P TS S ++ P+G +S T P + ST T ++ ST +
Sbjct: 333 PSTSTSCTTSTSIPPTG-NSTTPVTPTVPPTSTSSTSTPPPPASTSSTGT 381
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 516 KKLKCLFVEARFSISTSWKSRQNTMAATRPTLKSYRTFGAS--CTACRWRTSG 364
KK++ + SIS + S+Q + A+ TLKSY+ G + C + + SG
Sbjct: 383 KKMEQFLNTSTGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSG 435
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 5.5
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +3
Query: 315 SPPTGTRSDPVVN*SSFRLSSSGKLCTMPQKSCTILESDA*PPSYSVDFSSSWKSKTLLP 494
+P T +P V +F SS+ T P + + + PS + D + S S + P
Sbjct: 371 NPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPL--ASTLKPSTANDTNGSSSSSSSNP 428
Query: 495 QTSISTSSGLKNAP 536
+TS +S +N P
Sbjct: 429 RTSSPLASNAENKP 442
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 562 LMVTDESPLGAFFRPEEVEMLVCGSKVFDF-HELEKSTEY 446
+M+T ++PL A + E+V ++ + V D HE EK E+
Sbjct: 705 MMITGDNPLTAVYVAEQVGIVEKPTLVLDIKHENEKILEW 744
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 507 STSSGLKNAPSGLSSVTIKNPRRNALNCVSTD 602
S G LSS T+KNP A N +TD
Sbjct: 123 SKQMGANQISPSLSSKTMKNPADKANNTTATD 154
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,570,680
Number of Sequences: 5004
Number of extensions: 51945
Number of successful extensions: 243
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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