Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0238
         (326 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    24   1.7  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    24   1.7  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   2.2  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   2.9  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   2.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    22   5.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   6.8  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    22   6.8  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    22   6.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         21   8.9  

>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 154 GAHTSGPGQ*CSRFYVQELEAALLR 228
           G +T+  G   SRFYV++LE   LR
Sbjct: 199 GLYTTESGIHLSRFYVRDLEVNDLR 223


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 154 GAHTSGPGQ*CSRFYVQELEAALLR 228
           G +T+  G   SRFYV++LE   LR
Sbjct: 199 GLYTTESGIHLSRFYVRDLEVNDLR 223


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 112 DGAGCSQAPPVRVQGAHTSGPG 177
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 149 TRTGGAWLHPAPSRSFLNTPTLKVGLPIDSFRYFSE 42
           T +   +LH  P+R  L   T++ GL  D    F++
Sbjct: 175 TSSSELFLHTEPARCLLRCFTIRAGLYSDQHGPFAD 210


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 149 TRTGGAWLHPAPSRSFLNTPTLKVGLPIDSFRYFSE 42
           T +   +LH  P+R  L   T++ GL  D    F++
Sbjct: 175 TSSSELFLHTEPARCLLRCFTIRAGLYSDQHGPFAD 210


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 318 VPPPRTRGIRATARPVP 268
           VPPPRT      + P P
Sbjct: 642 VPPPRTNSQSQASEPTP 658


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 157 RLEHEREGLGCTLHRLAL 104
           RL  ER   GC LHR  L
Sbjct: 487 RLTFERLSGGCNLHRCKL 504


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 214 AALLREQGGWSPNQCRIMG 270
           AA     G W+ NQC + G
Sbjct: 169 AAATGVPGSWNTNQCSLTG 187


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 214 AALLREQGGWSPNQCRIMG 270
           AA     G W+ NQC + G
Sbjct: 169 AAAAGVPGSWNTNQCSLTG 187


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/23 (26%), Positives = 9/23 (39%)
 Frame = -1

Query: 323 YEYHHHGHAEFGRQHVRYPMIRH 255
           +  HHH H         +P + H
Sbjct: 118 HHQHHHQHPHLPHVQQHHPSVHH 140



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 320 EYHHHGHAE 294
           ++HHH HAE
Sbjct: 656 QHHHHHHAE 664


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,465
Number of Sequences: 2352
Number of extensions: 7561
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)