Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0238
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 136 2e-32
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 135 3e-32
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 135 3e-32
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 135 3e-32
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 135 3e-32
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 0.83
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 28 5.8
BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746... 28 7.7
AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens ... 28 7.7
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 136 bits (328), Expect = 2e-32
Identities = 64/88 (72%), Positives = 74/88 (84%)
Frame = +2
Query: 62 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 241
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 242 GHQTSAESWGTGRAVARIPRVRGGGTHR 325
GHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHR 100
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQT AESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHR 86
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 244
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHR 325
HQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHR 86
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 61 ESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTS 168
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 194 SMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGG 316
++++ +RQP + AG A +W TG A A P V GG
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGG 201
>BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746
protein.
Length = 644
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 169 GPGQ*CSRFYVQELEAALLREQGGWSPNQCRIMGYRTCCRP 291
GPGQ +RF+ + QG P+Q ++G R RP
Sbjct: 312 GPGQ-ATRFFPSPAQEGAWESQGSSFPSQDPVLGLREPARP 351
>AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ46378 fis, clone TESTI4052775. ).
Length = 459
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 169 GPGQ*CSRFYVQELEAALLREQGGWSPNQCRIMGYRTCCRP 291
GPGQ +RF+ + QG P+Q ++G R RP
Sbjct: 127 GPGQ-ATRFFPSPAQEGAWESQGSSFPSQDPVLGLREPARP 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,100,285
Number of Sequences: 237096
Number of extensions: 1153019
Number of successful extensions: 2737
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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