Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0237
(320 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F674 Cluster: Transcription factor A; n=1; Bombyx mor... 89 2e-17
UniRef50_Q86BR8 Cluster: CG4217-PB, isoform B; n=3; Sophophora|R... 46 1e-04
UniRef50_UPI0000D56B7D Cluster: PREDICTED: similar to CG4217-PA,... 45 3e-04
UniRef50_O15347 Cluster: High mobility group protein B3; n=143; ... 36 0.17
UniRef50_UPI0000E461C4 Cluster: PREDICTED: similar to HMG box (b... 34 0.53
UniRef50_A6SKE4 Cluster: High mobility group protein; n=2; Scler... 34 0.53
UniRef50_Q4H311 Cluster: Transcription factor protein; n=1; Cion... 34 0.70
UniRef50_Q6T4W0 Cluster: High mobility group box protein HMGB2; ... 33 0.93
UniRef50_UPI0001509FA4 Cluster: HMG box family protein; n=1; Te... 33 1.6
UniRef50_UPI000049A36D Cluster: high mobility group protein; n=2... 33 1.6
UniRef50_Q5KWP4 Cluster: Stage 0 sporulation protein B; n=2; Geo... 33 1.6
UniRef50_Q9XGD1 Cluster: HMG1 protein; n=2; Poaceae|Rep: HMG1 pr... 33 1.6
UniRef50_A7QQN2 Cluster: Chromosome undetermined scaffold_143, w... 33 1.6
UniRef50_UPI00015B60E8 Cluster: PREDICTED: similar to mitochondr... 32 2.1
UniRef50_UPI0000DA3E51 Cluster: PREDICTED: similar to High mobil... 32 2.1
UniRef50_UPI00005A2ADD Cluster: PREDICTED: similar to high-mobil... 32 2.1
UniRef50_O82510 Cluster: F2P3.3 protein; n=1; Arabidopsis thalia... 32 2.1
UniRef50_Q56J87 Cluster: AmphiHMG1/2-like protein; n=1; Adineta ... 32 2.1
UniRef50_Q59GW1 Cluster: High-mobility group box 1 variant; n=13... 32 2.1
UniRef50_P26583 Cluster: High mobility group protein B2; n=53; E... 32 2.1
UniRef50_Q9SUP7 Cluster: 98b like protein; n=7; Magnoliophyta|Re... 32 2.8
UniRef50_Q4PGF5 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_Q9FHL6 Cluster: Genomic DNA, chromosome 5, TAC clone:K1... 31 3.7
UniRef50_P23497 Cluster: Nuclear autoantigen Sp-100; n=128; Eute... 31 3.7
UniRef50_P40619 Cluster: HMG1/2-like protein; n=5; Magnoliophyta... 31 3.7
UniRef50_Q16HS9 Cluster: Putative uncharacterized protein; n=2; ... 31 4.9
UniRef50_Q7SFW9 Cluster: Predicted protein; n=2; Sordariomycetes... 31 4.9
UniRef50_Q2HFY3 Cluster: Putative uncharacterized protein; n=2; ... 31 4.9
UniRef50_Q6DC55 Cluster: Ubtf protein; n=5; Clupeocephala|Rep: U... 31 6.5
UniRef50_Q08BL2 Cluster: Zgc:153358; n=2; Danio rerio|Rep: Zgc:1... 31 6.5
UniRef50_A4SBF2 Cluster: Predicted protein; n=1; Ostreococcus lu... 31 6.5
UniRef50_Q6FN37 Cluster: Similar to sp|Q02486 Saccharomyces cere... 31 6.5
UniRef50_Q017Y9 Cluster: DNA-binding protein; n=1; Ostreococcus ... 30 8.6
UniRef50_A2DVU0 Cluster: Surface antigen BspA-like; n=6; Trichom... 30 8.6
UniRef50_A0E6B8 Cluster: Chromosome undetermined scaffold_8, who... 30 8.6
UniRef50_A0DTY5 Cluster: Chromosome undetermined scaffold_63, wh... 30 8.6
UniRef50_Q6CLP2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 30 8.6
UniRef50_P33417 Cluster: Intrastrand cross-link recognition prot... 30 8.6
>UniRef50_Q2F674 Cluster: Transcription factor A; n=1; Bombyx
mori|Rep: Transcription factor A - Bombyx mori (Silk
moth)
Length = 249
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3
Query: 189 ACDYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
+CDYTKKSAEQ LGLNKPKRPLTPFFKFM QMRPALLAKNPG+S
Sbjct: 34 SCDYTKKSAEQSLGLNKPKRPLTPFFKFMSQMRPALLAKNPGMS 77
Score = 73.7 bits (173), Expect = 7e-13
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = +2
Query: 89 MTTYTQLQRLSNYFLGNYKTVLCGRVNWITPIQCM*LYKKICRAEVG 229
MTTYTQLQRLSNYFLGNYKTVLCG VNW+TP+Q KK +G
Sbjct: 1 MTTYTQLQRLSNYFLGNYKTVLCGSVNWMTPMQSCDYTKKSAEQSLG 47
>UniRef50_Q86BR8 Cluster: CG4217-PB, isoform B; n=3; Sophophora|Rep:
CG4217-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 284
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 KSAEQRLGLN-KPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ E++LGL +PK+PLTP+F+FM + RP L A NP I+
Sbjct: 66 KTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQIT 104
>UniRef50_UPI0000D56B7D Cluster: PREDICTED: similar to CG4217-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4217-PA, isoform A - Tribolium castaneum
Length = 240
Score = 45.2 bits (102), Expect = 3e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
NKPK+PLTP+FKF+ RPALL +NP +
Sbjct: 44 NKPKKPLTPYFKFIQDHRPALLKQNPNL 71
>UniRef50_O15347 Cluster: High mobility group protein B3; n=143;
Euteleostomi|Rep: High mobility group protein B3 - Homo
sapiens (Human)
Length = 200
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 207 KSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K +++ N PKRP + FF F + RP + + NPGIS
Sbjct: 82 KGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS 119
>UniRef50_UPI0000E461C4 Cluster: PREDICTED: similar to HMG box (bp.
1499..1757); n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to HMG box (bp. 1499..1757) -
Strongylocentrotus purpuratus
Length = 393
Score = 34.3 bits (75), Expect = 0.53
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 201 TKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
TKKS +Q N+PKRP T + ++ R + + PGIS
Sbjct: 245 TKKSVKQEKDANRPKRPTTGYMLWLNDQREDIKEQFPGIS 284
>UniRef50_A6SKE4 Cluster: High mobility group protein; n=2;
Sclerotiniaceae|Rep: High mobility group protein -
Botryotinia fuckeliana B05.10
Length = 341
Score = 34.3 bits (75), Expect = 0.53
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPG 314
N PKRPLTPFF +M RP ++AK+ G
Sbjct: 119 NAPKRPLTPFFLYMQTARP-IIAKDLG 144
>UniRef50_Q4H311 Cluster: Transcription factor protein; n=1; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 164
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 207 KSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ + R N PK+PLT +F FM R ++ +NP +S
Sbjct: 10 KTLKFRKDKNAPKKPLTAYFIFMNDCRQKVIKENPSLS 47
>UniRef50_Q6T4W0 Cluster: High mobility group box protein HMGB2;
n=1; Suberites domuncula|Rep: High mobility group box
protein HMGB2 - Suberites domuncula (Sponge)
Length = 183
Score = 33.5 bits (73), Expect = 0.93
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 195 DYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
D K +++ KPKR LT F F + RP + KNPG S
Sbjct: 80 DGEKSKKKKQKDKTKPKRSLTAFLFFCSEERPKMKEKNPGSS 121
>UniRef50_UPI0001509FA4 Cluster: HMG box family protein; n=1;
Tetrahymena thermophila SB210|Rep: HMG box family
protein - Tetrahymena thermophila SB210
Length = 289
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 195 DYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
D KK +++ N PK+P++ + F +P + AKNP +S
Sbjct: 69 DDKKKKKKEKKDPNAPKKPMSAYLIFCQTRQPEIKAKNPDLS 110
>UniRef50_UPI000049A36D Cluster: high mobility group protein; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: high mobility group
protein - Entamoeba histolytica HM-1:IMSS
Length = 114
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 204 KKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGI 317
KK+ + + N+PKRP TP+F ++ + R ++ ++P I
Sbjct: 17 KKAKKDKKDPNRPKRPPTPYFIYLNEHRASIKEEHPDI 54
>UniRef50_Q5KWP4 Cluster: Stage 0 sporulation protein B; n=2;
Geobacillus|Rep: Stage 0 sporulation protein B -
Geobacillus kaustophilus
Length = 182
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 302 GKKSWSHLSHELKEWRKRSFRLVQAQ 225
GK WS +L EW ++ FRL++AQ
Sbjct: 85 GKADWSQYDEQLAEWCRKFFRLLEAQ 110
>UniRef50_Q9XGD1 Cluster: HMG1 protein; n=2; Poaceae|Rep: HMG1
protein - Zea mays (Maize)
Length = 123
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 204 KKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNP 311
K + +R + KR LTPFF F+ + RP L K+P
Sbjct: 7 KATGAKRKKVGGAKRGLTPFFAFLAEFRPQYLEKHP 42
>UniRef50_A7QQN2 Cluster: Chromosome undetermined scaffold_143,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_143, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 169
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 177 RQYNACDYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGI 317
R N K QR+ KPK+P T FF F+ R +NP +
Sbjct: 42 RSGNKAKAKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDV 88
>UniRef50_UPI00015B60E8 Cluster: PREDICTED: similar to mitochondrial
transcription factor A; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial transcription factor
A - Nasonia vitripennis
Length = 248
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 219 QRLGL-NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
++LG+ PKRP TP+ +F +RP + NP ++
Sbjct: 38 KQLGIPTPPKRPCTPYIRFFQNIRPKIKENNPDLN 72
>UniRef50_UPI0000DA3E51 Cluster: PREDICTED: similar to High mobility
group protein 2 (HMG-2); n=8; Theria|Rep: PREDICTED:
similar to High mobility group protein 2 (HMG-2) -
Rattus norvegicus
Length = 336
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
N PKRP + FF F + RP + +++PG+S
Sbjct: 219 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS 247
>UniRef50_UPI00005A2ADD Cluster: PREDICTED: similar to high-mobility
group box 2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to high-mobility group box 2 - Canis familiaris
Length = 347
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
N PKRP + FF F + RP + +++PG+S
Sbjct: 300 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS 328
>UniRef50_O82510 Cluster: F2P3.3 protein; n=1; Arabidopsis
thaliana|Rep: F2P3.3 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 401
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 207 KSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K + + NKPK+P + +F F R ++L ++PGI+
Sbjct: 316 KKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGIN 353
>UniRef50_Q56J87 Cluster: AmphiHMG1/2-like protein; n=1; Adineta
ricciae|Rep: AmphiHMG1/2-like protein - Adineta ricciae
Length = 142
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
N PKRPL+ FF F RP + K+P +S
Sbjct: 16 NAPKRPLSAFFLFSQDERPDIKKKSPSLS 44
>UniRef50_Q59GW1 Cluster: High-mobility group box 1 variant; n=13;
Eutheria|Rep: High-mobility group box 1 variant - Homo
sapiens (Human)
Length = 176
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
N PKRP + FF F + RP + ++PG+S
Sbjct: 95 NAPKRPPSAFFLFCSEYRPKIKGEHPGLS 123
>UniRef50_P26583 Cluster: High mobility group protein B2; n=53;
Euteleostomi|Rep: High mobility group protein B2 - Homo
sapiens (Human)
Length = 209
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
N PKRP + FF F + RP + +++PG+S
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS 121
>UniRef50_Q9SUP7 Cluster: 98b like protein; n=7; Magnoliophyta|Rep:
98b like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 456
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 201 TKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPG 314
TKK + + NKPK+P + +F F R L + PG
Sbjct: 366 TKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPG 403
>UniRef50_Q4PGF5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 967
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 198 YTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNP 311
+ ++ + L KPKRPL+ + F+ +RP A+NP
Sbjct: 356 HKRRLKRKELSTGKPKRPLSAYLLFVNSVRPQRQAQNP 393
>UniRef50_Q9FHL6 Cluster: Genomic DNA, chromosome 5, TAC
clone:K19M13; n=5; Magnoliophyta|Rep: Genomic DNA,
chromosome 5, TAC clone:K19M13 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 226
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPG 314
NKPKRPLT FF FM R +++ G
Sbjct: 98 NKPKRPLTAFFIFMSDFRKTFKSEHNG 124
>UniRef50_P23497 Cluster: Nuclear autoantigen Sp-100; n=128;
Euteleostomi|Rep: Nuclear autoantigen Sp-100 - Homo
sapiens (Human)
Length = 879
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
N PKRP FF F + RP + ++PG+S
Sbjct: 767 NAPKRPPLAFFLFCSEYRPKIKGEHPGLS 795
>UniRef50_P40619 Cluster: HMG1/2-like protein; n=5;
Magnoliophyta|Rep: HMG1/2-like protein - Ipomoea nil
(Japanese morning glory) (Pharbitis nil)
Length = 144
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 201 TKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNP 311
TKK+ + NKPKRP + FF FM R K+P
Sbjct: 23 TKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHP 59
>UniRef50_Q16HS9 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 308
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 204 KKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ ++ N PK PLT + ++M + R A+ K+P +S
Sbjct: 51 KRKRKRVKDANAPKHPLTGYVRYMNEKRDAIRLKHPSLS 89
>UniRef50_Q7SFW9 Cluster: Predicted protein; n=2;
Sordariomycetes|Rep: Predicted protein - Neurospora
crassa
Length = 314
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPAL 296
N PKRPLTP+F +M RP +
Sbjct: 112 NAPKRPLTPYFLYMQTARPII 132
>UniRef50_Q2HFY3 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 359
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPAL 296
N PKRPLTP+F +M RP +
Sbjct: 152 NAPKRPLTPYFLYMQTARPII 172
>UniRef50_Q6DC55 Cluster: Ubtf protein; n=5; Clupeocephala|Rep: Ubtf
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 455
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 204 KKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
KKS++ + KPK P++ F F + RP L + P +S
Sbjct: 388 KKSSKAKPSAEKPKPPISAMFIFSEEKRPKLKQEKPELS 426
>UniRef50_Q08BL2 Cluster: Zgc:153358; n=2; Danio rerio|Rep:
Zgc:153358 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 277
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 240 PKRPLTPFFKFM*QMRPALLAKNPGI 317
PKRPLT + F+ M+P + +NP I
Sbjct: 47 PKRPLTAYMTFVKDMQPTVSKQNPSI 72
>UniRef50_A4SBF2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 543
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 204 KKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNP 311
KK+ E ++ + K+PLT F F RP++ A+NP
Sbjct: 453 KKAPEPKVEVPGMKKPLTAFLAFATDERPSVKAENP 488
>UniRef50_Q6FN37 Cluster: Similar to sp|Q02486 Saccharomyces
cerevisiae YMR072w; n=1; Candida glabrata|Rep: Similar
to sp|Q02486 Saccharomyces cerevisiae YMR072w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 201
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 195 DYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGIS 320
+Y K E L PK+PL+PF F ++R + ++NP +S
Sbjct: 114 EYKTKKQEFEAML-PPKKPLSPFLLFSNEVREEIKSQNPSLS 154
>UniRef50_Q017Y9 Cluster: DNA-binding protein; n=1; Ostreococcus
tauri|Rep: DNA-binding protein - Ostreococcus tauri
Length = 86
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNP 311
N PKRPL+ + F R A+L KNP
Sbjct: 24 NAPKRPLSAYMFFAKDQRAAILKKNP 49
>UniRef50_A2DVU0 Cluster: Surface antigen BspA-like; n=6;
Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
- Trichomonas vaginalis G3
Length = 727
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 235 TSLNDLLRHSLSSCDKCDQLFLPRTL 312
T L + H+ +SC KC +L+LP+ L
Sbjct: 84 TKLTKISNHAFNSCPKCVELYLPKGL 109
>UniRef50_A0E6B8 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 396
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = -1
Query: 272 ELKEWRKRSFRLVQAQPLL----CRFFC-IVTCIVLALSNLLF-RIEQSCNSLKNNY 120
E+ W+K S +Q P+L C FC IV C + L+F I S +K NY
Sbjct: 75 EMSLWQKYSGDYIQGMPVLPTGKCSLFCNIVCCFYFLIFGLVFVGIAGSITEIKLNY 131
>UniRef50_A0DTY5 Cluster: Chromosome undetermined scaffold_63, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_63,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 236
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
N PK+PLT FF F + R ++ +NP I
Sbjct: 50 NAPKKPLTAFFLFNQKYRQKVVERNPEI 77
>UniRef50_Q6CLP2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 161
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 240 PKRPLTPFFKFM*QMRPALLAKNPGIS 320
PK+P T F F+ + P L +NPG+S
Sbjct: 92 PKKPATSFGSFLKEKSPQLRTENPGLS 118
>UniRef50_P33417 Cluster: Intrastrand cross-link recognition
protein; n=2; Saccharomyces cerevisiae|Rep: Intrastrand
cross-link recognition protein - Saccharomyces
cerevisiae (Baker's yeast)
Length = 597
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 240 PKRPLTPFFKFM*QMRPALLAKNP 311
PKRP PF +F ++RP ++ +NP
Sbjct: 434 PKRPSGPFIQFTQEIRPTVVKENP 457
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,279,732
Number of Sequences: 1657284
Number of extensions: 5266771
Number of successful extensions: 11069
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 10909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11069
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -