Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0237
(320 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061457-1|AAL29005.1| 257|Drosophila melanogaster LD40493p pro... 46 8e-06
AE014297-2817|AAF55779.2| 284|Drosophila melanogaster CG4217-PB... 46 8e-06
AE014297-2816|AAN14356.1| 257|Drosophila melanogaster CG4217-PA... 46 8e-06
AB045318-1|BAB20089.1| 257|Drosophila melanogaster mitochondria... 46 8e-06
AB040745-1|BAB62223.1| 257|Drosophila melanogaster mitochondria... 46 8e-06
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 32 0.19
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 32 0.19
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 32 0.19
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 31 0.44
X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein ... 29 1.8
M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility ... 29 1.8
AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p pro... 29 1.8
AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950 prot... 29 1.8
AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-P... 29 1.8
AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-P... 29 1.8
AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein ... 27 5.4
AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p pro... 27 5.4
AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB... 27 5.4
>AY061457-1|AAL29005.1| 257|Drosophila melanogaster LD40493p
protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-06
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 KSAEQRLGLN-KPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ E++LGL +PK+PLTP+F+FM + RP L A NP I+
Sbjct: 39 KTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQIT 77
>AE014297-2817|AAF55779.2| 284|Drosophila melanogaster CG4217-PB,
isoform B protein.
Length = 284
Score = 46.4 bits (105), Expect = 8e-06
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 KSAEQRLGLN-KPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ E++LGL +PK+PLTP+F+FM + RP L A NP I+
Sbjct: 66 KTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQIT 104
>AE014297-2816|AAN14356.1| 257|Drosophila melanogaster CG4217-PA,
isoform A protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-06
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 KSAEQRLGLN-KPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ E++LGL +PK+PLTP+F+FM + RP L A NP I+
Sbjct: 39 KTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQIT 77
>AB045318-1|BAB20089.1| 257|Drosophila melanogaster mitochondrial
transcription factorA protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-06
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 KSAEQRLGLN-KPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ E++LGL +PK+PLTP+F+FM + RP L A NP I+
Sbjct: 39 KTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQIT 77
>AB040745-1|BAB62223.1| 257|Drosophila melanogaster mitochondrial
transcription factorA protein.
Length = 257
Score = 46.4 bits (105), Expect = 8e-06
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 KSAEQRLGLN-KPKRPLTPFFKFM*QMRPALLAKNPGIS 320
K+ E++LGL +PK+PLTP+F+FM + RP L A NP I+
Sbjct: 39 KTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKAANPQIT 77
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 177 RQYNACDYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+++ + TKK ++++ KPKR T F ++ R ++ +NPGI
Sbjct: 534 KKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGI 580
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 177 RQYNACDYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+++ + TKK ++++ KPKR T F ++ R ++ +NPGI
Sbjct: 534 KKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGI 580
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 177 RQYNACDYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+++ + TKK ++++ KPKR T F ++ R ++ +NPGI
Sbjct: 534 KKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGI 580
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 30.7 bits (66), Expect = 0.44
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 177 RQYNACDYTKKSAEQRLGLNKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+++ + TKK ++++ KPKR T F ++ R + +NPGI
Sbjct: 534 KKHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGI 580
>X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility
group protein protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-PB,
isoform B protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-PA,
isoform A protein.
Length = 112
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 234 NKPKRPLTPFFKFM*QMRPALLAKNPGI 317
+KPKRPL+ + ++ R ++ +NPGI
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGI 30
>AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein
protein.
Length = 1199
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 200 YKKICRAEVGPEQA*TTSYAIL*VHVTNATSSSCQE 307
Y CR + G A Y I+ + TNATS CQE
Sbjct: 655 YMAYCRLDSGFSSA--AIYRIISLWFTNATSKQCQE 688
>AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p
protein.
Length = 574
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 200 YKKICRAEVGPEQA*TTSYAIL*VHVTNATSSSCQE 307
Y CR + G A Y I+ + TNATS CQE
Sbjct: 30 YMAYCRLDSGFSSA--AIYRIISLWFTNATSKQCQE 63
>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
protein.
Length = 2767
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 200 YKKICRAEVGPEQA*TTSYAIL*VHVTNATSSSCQE 307
Y CR + G A Y I+ + TNATS CQE
Sbjct: 2223 YMAYCRLDSGFSSA--AIYRIISLWFTNATSKQCQE 2256
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,514,942
Number of Sequences: 53049
Number of extensions: 233753
Number of successful extensions: 501
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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