Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0236
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    24   1.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.8  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 547 TPRRSLCALSQILPHEGAFC 488
           TPRRS C L Q+    G  C
Sbjct: 203 TPRRSGCKLGQVFDDVGKKC 222


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/23 (34%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -1

Query: 454 DVVLPILCV--GTVHIMLLISYC 392
           D+ LP+LC+   T+ I++ ++ C
Sbjct: 278 DIFLPLLCILTNTLEILITVTVC 300



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 410 AFNFLLFFCAVYICI 366
           A  F+  FC++Y CI
Sbjct: 247 ASQFVGIFCSLYFCI 261


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/23 (34%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -1

Query: 454 DVVLPILCV--GTVHIMLLISYC 392
           D+ LP+LC+   T+ I++ ++ C
Sbjct: 103 DIFLPLLCILTNTLEILITVTVC 125



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 410 AFNFLLFFCAVYICI 366
           A  F+  FC++Y CI
Sbjct: 72  ASQFVGIFCSLYFCI 86


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 476 LMTPMMSGCGIADFMCRDCSY 414
           L + M S   +  + CRDCSY
Sbjct: 274 LNSHMKSHSNVYRYSCRDCSY 294



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = -3

Query: 482 HSLMTPMMSGCGIADFMCRDCSYNAFN 402
           H L   + +  G   F C  C Y   N
Sbjct: 244 HHLEYHLRNHAGSKPFQCNKCDYTCVN 270


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 476 LMTPMMSGCGIADFMCRDCSY 414
           L + M S   +  + CRDCSY
Sbjct: 32  LNSHMKSHSNVYRYSCRDCSY 52



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = -3

Query: 482 HSLMTPMMSGCGIADFMCRDCSYNAFN 402
           H L   + +  G   F C  C Y   N
Sbjct: 2   HHLEYHLRNHAGSKPFQCNKCDYTCVN 28


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 259 NKLAKILKQLHQSCQTDEGEDD 324
           +K  KI K+ H+S   D+ +DD
Sbjct: 274 HKYEKIDKEEHESMDDDDDDDD 295


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 436  LCVGTVHIMLLISYCSFVQYTFVSQEHIFLVV 341
            +C   +   + +  C F  Y F S E I LV+
Sbjct: 1123 ICWNVLLNCVYLFLCGFCVYEFASDERIKLVI 1154


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 437 NRQYHIHSSWVSSENAAAKC 496
           N+ Y   + W SS+N    C
Sbjct: 677 NKFYRQEAQWTSSDNPCTTC 696


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 43  QLLTYIKSAVTRNHSEKSINSILDYISTSRNMEL 144
           Q L  +K  V RN    +I SIL +    +N+E+
Sbjct: 562 QPLRTLKIGVYRNIKNFNIPSILQFNDGLKNLEI 595


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 295 SCQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHI 435
           S Q+ EGE+D +     +++    I    A  NN   + + E  + I
Sbjct: 48  SSQSTEGENDARPRASQVKLNVFSIIKSRAAGNNNIQRVVPEIKIQI 94


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -2

Query: 258 EISSVIIQFPKFSVG 214
           ++ ++++ FPKF+ G
Sbjct: 279 DLKTLVLNFPKFTAG 293


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 25  MMARYKQLLTYIKSAVTRNH 84
           ++ RYK+L   I   ++RNH
Sbjct: 174 ILMRYKELNRVILDNMSRNH 193


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 349 EIYALEIQMYTAQKNNKKL 405
           EIY LEIQ +  Q  N  +
Sbjct: 358 EIYNLEIQRFIQQIGNSDI 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,482
Number of Sequences: 336
Number of extensions: 2305
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)