Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0236
(565 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0) 31 0.49
SB_5255| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.2) 31 0.65
SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12) 30 1.1
SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0) 30 1.5
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_54318| Best HMM Match : TPR_2 (HMM E-Value=2.2e-23) 29 3.5
SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_37811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_27635| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 40.7 bits (91), Expect = 8e-04
Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 5/191 (2%)
Frame = +1
Query: 4 KLSNFTEMMARYKQLLTYIKSAVTRNHSEKS-----INSILDYISTSRNMELLQDFYETT 168
+L N+ E M Y+Q L + T N S+++ I + +Y+ N E +Y+
Sbjct: 242 RLGNYEEAMKYYQQALQVYER--TGNESKQAGVRQDIGVVQEYLG---NYEEAMKYYQQA 296
Query: 169 LEALKDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLL 348
L+ + N+ +G + GD+ + K +Q+ Q + E D + LL
Sbjct: 297 LQVFERTGNENDQAIVRHNIGVVQNSLGDYEEAMKYYQQVLQVFERTGNESD--QADVLL 354
Query: 349 EIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAH 528
I ++ + N K+ Y+Q+L + + V+R+ G + + G +E+A
Sbjct: 355 NIGVVQQSL----GNYKEAMKYYQQALQVFERTGNESYQAVVRQSIGVVQVSLGNYEEAM 410
Query: 529 TDFFEAFKNYD 561
+ +A + ++
Sbjct: 411 KYYQQALQVFE 421
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 31.5 bits (68), Expect = 0.49
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Frame = +1
Query: 4 KLSNFTEMMARYKQLLTYIKSAVTRNHSEKS--INSILDYISTSRNMELLQDFYETTLEA 177
+L F E +R ++++ ++++ + KS + S ++ + N +D Y T L+
Sbjct: 4861 ELIEFEESSSRCERIVNMYQASLPKQSPSKSEPLESQIEKLQCLYNEMEEKDIYLTKLKT 4920
Query: 178 LKDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQ--TDEGEDDLKKGTQLLE 351
D DR T G+ GD+N+ L Q + C+ + E K+ Q LE
Sbjct: 4921 SGDVLADRDPSSTTHTAGRANKLFGDWNQAKTSLGQALKKCEGLSLAKEKFEKEYNQCLE 4980
Query: 352 -IYALE--IQMYTAQKNNKKLK 408
+ ALE IQ A +KK K
Sbjct: 4981 SLSALEESIQQPFASSEDKKAK 5002
>SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1106
Score = 31.5 bits (68), Expect = 0.49
Identities = 34/182 (18%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Frame = +1
Query: 22 EMMARYKQLLTYIKSAVTRNHSEKSINSILDYIST-SRNMELLQDFYETTLEALKDAKND 198
E++ +Y++ I+ A++ + +++ L + T S + +YE L+ N
Sbjct: 446 EVIFKYEEKKKCIRQAISLVATLENVPPNLGVLYTASGDFNEANKYYEKQLDLCLMNGNV 505
Query: 199 RLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALEIQMY 378
K + +G L+ +G+++K + +Q D+ E + +Q + +Y + +++
Sbjct: 506 VGQAKAHLIMGILHLSQGNYDKAMECCQQAR-----DKYEKNGSTYSQEI-LYWMMAEVH 559
Query: 379 TAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNY 558
+ N K+ + + + PL+ +I +C GK+++ G+F A + ++F Y
Sbjct: 560 FIRLNYKEALEYFLLAEYYSPKTDTPLL-SIIYQCIGKLYVCMGQFGDAESYLLKSFICY 618
Query: 559 DE 564
++
Sbjct: 619 EQ 620
>SB_5255| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.2)
Length = 104
Score = 31.1 bits (67), Expect = 0.65
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 46 LLTYIKSAVTRNHSEKSINSILDYISTSR-NMELLQDFYETTLEALKDAKND 198
LL Y ++ R KS N DYI+ R N ++ FYET L + + KND
Sbjct: 46 LLQYPTPSLVRE-IRKSFNDTEDYINNMRANSVIVSIFYETLLTDVFEEKND 96
>SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)
Length = 672
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 ARYKQLLTYIKSAVTRNHSEKSINSILDYIST-SRNMELLQDFYETTLEA-LKDAKNDRL 204
A++ LL S +T+ +I++ L+Y S S EL QD E A L + K+ +
Sbjct: 403 AKFMDLLEGRNSNLTKM---SNISAYLEYTSIPSYFPELKQDIQEMPCAAGLLNRKHLNI 459
Query: 205 WFKTNTKLGKLYYD 246
W LGKL++D
Sbjct: 460 WLSDGNTLGKLHFD 473
>SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 495
Score = 29.9 bits (64), Expect = 1.5
Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 3/187 (1%)
Frame = +1
Query: 7 LSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEALKD 186
L N+ E M Y+Q L + + K ++I + N E +Y+ L+ +
Sbjct: 74 LGNYEEAMKYYQQALQVFERTGNESKQAKVRHNIGVVQDSLGNYEEAMKYYQQALQVFER 133
Query: 187 AKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQ---TDEGEDDLKKGTQLLEIY 357
N+ +G + G++ + K +Q Q + + G+ D++ +++
Sbjct: 134 TGNESDQVDVRQNIGVVQKSLGNYEEAMKYYQQALQVFERTGNESGQADVRHNIGVVQ-- 191
Query: 358 ALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDF 537
N ++ Y+Q+L + + +R G + R G +E+A +
Sbjct: 192 -------QCLGNYEEAMKYYQQALQVYERTGNESKQASVRLNIGGVQQRLGNYEEAMKYY 244
Query: 538 FEAFKNY 558
+A + Y
Sbjct: 245 QQALQVY 251
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 487 GKMHLREGEFEKAHTDFFEAFKNYDE 564
G H GE+ KA F EA K YDE
Sbjct: 558 GVTHFSMGEYNKAANSFEEALKLYDE 583
>SB_54318| Best HMM Match : TPR_2 (HMM E-Value=2.2e-23)
Length = 640
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 487 GKMHLREGEFEKAHTDFFEAFKNYDE 564
G H GE+ KA F EA K YDE
Sbjct: 350 GVTHFSMGEYNKAANSFEEALKLYDE 375
>SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 28.3 bits (60), Expect = 4.6
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Frame = +1
Query: 58 IKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEALKDAKND-RLWFK-TNTKLG 231
IK V HS + + + R + E A+KD ND LW K +L
Sbjct: 1249 IKGGVIAGHSGLAAHKANEECQEIRYFSEAYNCVEALATAVKDTPNDVELWIKLAQLRLN 1308
Query: 232 KLYYDRGDFNKLAKILK-QLHQSCQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 408
+ D ++L + K L Q+ T L+ +++ +Q+Y+ Q + +
Sbjct: 1309 QKQSDVHSPSRLQEAGKANLMQALDTLSR--GLEANANSEKLWLEYLQLYSLQSTREDQQ 1366
Query: 409 ALYEQSL 429
L+EQ+L
Sbjct: 1367 ELFEQAL 1373
>SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1950
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 199 RLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGE 318
R+ + NT +GK+ RG+ NK + K+ + EGE
Sbjct: 53 RMQMRDNTTVGKILDIRGEMNKALGLKKRSLSGTKKSEGE 92
>SB_37811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 10 SNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDY----ISTSRNMELLQDFYETTLEA 177
+N + +K L + +A ++ S S++++ + +ST L+ F +TTL+
Sbjct: 128 ANIVKSTGLWKSLADHHTTAPKQSSSRLSVSTVKQHARKKLSTVDRNHFLRSFGKTTLQG 187
Query: 178 LKDAKNDRLWFKTNTKLGKL 237
+ + R T T++GKL
Sbjct: 188 YMEEERYRNNGTTKTEVGKL 207
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +1
Query: 346 LEIYALEIQMYTAQKNN----KKLKALYEQSLHIKSAIPHPLIMG 468
L I A I Y Q+N KK K + LH KS + PL++G
Sbjct: 4294 LPIVASGISRYATQRNMRLNPKKCKEMVIDFLHYKSTVLSPLLIG 4338
>SB_27635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 274 ILKQLHQSCQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHI 435
IL + C T + ++ K +L I + +A+ + KK+KAL+E+S+++
Sbjct: 60 ILMIYDKHCSTRQPPANMDKRLVVLLIVLVATMSVSAKPSLKKVKALFERSVNL 113
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,350,825
Number of Sequences: 59808
Number of extensions: 284364
Number of successful extensions: 807
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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