Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0236
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012629-1|AAH12629.1| 443|Homo sapiens COP9 constitutive photo... 363 e-100
AK222590-1|BAD96310.1| 443|Homo sapiens COP9 constitutive photo... 363 e-100
AF120268-1|AAD30269.1| 305|Homo sapiens ALIEN protein. 363 e-100
AF084260-1|AAC34122.1| 443|Homo sapiens signalosome subunit 2 p... 363 e-100
AF100762-1|AAD43026.1| 443|Homo sapiens thyroid receptor intera... 361 e-100
CR542063-1|CAG46860.1| 443|Homo sapiens TRIP15 protein. 361 1e-99
AF212227-1|AAK26250.1| 450|Homo sapiens TRIP15-ISO protein. 354 1e-97
AB209799-1|BAD93036.1| 451|Homo sapiens COP9 constitutive photo... 354 1e-97
L40388-1|AAC41734.1| 233|Homo sapiens thyroid receptor interact... 293 2e-79
AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit ... 39 0.011
BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome, ma... 39 0.014
BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome, ma... 39 0.014
AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPa... 39 0.014
AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit ... 39 0.014
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 38 0.024
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 38 0.024
BC111750-1|AAI11751.1| 1025|Homo sapiens interferon induced with... 30 4.9
BC078180-1|AAH78180.1| 772|Homo sapiens IFIH1 protein protein. 30 4.9
AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box p... 30 4.9
AK056293-1|BAB71141.1| 468|Homo sapiens protein ( Homo sapiens ... 30 4.9
AF095844-1|AAG34368.1| 1025|Homo sapiens melanoma differentiatio... 30 4.9
AC007750-3|AAY24206.1| 589|Homo sapiens unknown protein. 30 4.9
>BC012629-1|AAH12629.1| 443|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 2 (Arabidopsis)
protein.
Length = 443
Score = 363 bits (893), Expect = e-100
Identities = 170/188 (90%), Positives = 181/188 (96%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 80 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 139
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 140 KDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 199
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 540
LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF
Sbjct: 200 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 259
Query: 541 EAFKNYDE 564
EAFKNYDE
Sbjct: 260 EAFKNYDE 267
>AK222590-1|BAD96310.1| 443|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 2 variant protein.
Length = 443
Score = 363 bits (893), Expect = e-100
Identities = 170/188 (90%), Positives = 181/188 (96%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 80 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 139
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 140 KDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 199
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 540
LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF
Sbjct: 200 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 259
Query: 541 EAFKNYDE 564
EAFKNYDE
Sbjct: 260 EAFKNYDE 267
>AF120268-1|AAD30269.1| 305|Homo sapiens ALIEN protein.
Length = 305
Score = 363 bits (893), Expect = e-100
Identities = 170/188 (90%), Positives = 181/188 (96%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 77 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 136
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 137 KDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 196
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 540
LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF
Sbjct: 197 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 256
Query: 541 EAFKNYDE 564
EAFKNYDE
Sbjct: 257 EAFKNYDE 264
>AF084260-1|AAC34122.1| 443|Homo sapiens signalosome subunit 2
protein.
Length = 443
Score = 363 bits (893), Expect = e-100
Identities = 170/188 (90%), Positives = 181/188 (96%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 80 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 139
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 140 KDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 199
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 540
LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF
Sbjct: 200 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 259
Query: 541 EAFKNYDE 564
EAFKNYDE
Sbjct: 260 EAFKNYDE 267
>AF100762-1|AAD43026.1| 443|Homo sapiens thyroid receptor
interactor trip15 protein.
Length = 443
Score = 361 bits (888), Expect = e-100
Identities = 169/188 (89%), Positives = 180/188 (95%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 80 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 139
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFK NTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 140 KDAKNDRLWFKANTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 199
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 540
LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF
Sbjct: 200 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 259
Query: 541 EAFKNYDE 564
EAFKNYDE
Sbjct: 260 EAFKNYDE 267
>CR542063-1|CAG46860.1| 443|Homo sapiens TRIP15 protein.
Length = 443
Score = 361 bits (887), Expect = 1e-99
Identities = 169/188 (89%), Positives = 180/188 (95%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 80 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 139
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 140 KDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 199
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 540
LEIQMYTAQKN KKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF
Sbjct: 200 LEIQMYTAQKNTKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFF 259
Query: 541 EAFKNYDE 564
EAFKNYDE
Sbjct: 260 EAFKNYDE 267
>AF212227-1|AAK26250.1| 450|Homo sapiens TRIP15-ISO protein.
Length = 450
Score = 354 bits (870), Expect = 1e-97
Identities = 170/195 (87%), Positives = 181/195 (92%), Gaps = 7/195 (3%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRN-------MELLQDFY 159
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FY
Sbjct: 80 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQNSDFLCQMDLLQEFY 139
Query: 160 ETTLEALKDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGT 339
ETTLEALKDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGT
Sbjct: 140 ETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGT 199
Query: 340 QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFE 519
QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFE
Sbjct: 200 QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFE 259
Query: 520 KAHTDFFEAFKNYDE 564
KAHTDFFEAFKNYDE
Sbjct: 260 KAHTDFFEAFKNYDE 274
>AB209799-1|BAD93036.1| 451|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 2 variant protein.
Length = 451
Score = 354 bits (870), Expect = 1e-97
Identities = 170/195 (87%), Positives = 181/195 (92%), Gaps = 7/195 (3%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRN-------MELLQDFY 159
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FY
Sbjct: 81 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQNSDFLCQMDLLQEFY 140
Query: 160 ETTLEALKDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGT 339
ETTLEALKDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGT
Sbjct: 141 ETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGT 200
Query: 340 QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFE 519
QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFE
Sbjct: 201 QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFE 260
Query: 520 KAHTDFFEAFKNYDE 564
KAHTDFFEAFKNYDE
Sbjct: 261 KAHTDFFEAFKNYDE 275
>L40388-1|AAC41734.1| 233|Homo sapiens thyroid receptor interactor
protein.
Length = 233
Score = 293 bits (720), Expect = 2e-79
Identities = 139/157 (88%), Positives = 150/157 (95%)
Frame = +1
Query: 1 FKLSNFTEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQDFYETTLEAL 180
FKL+NF EMM RYKQLLTYI+SAVTRN+SEKSINSILDYISTS+ M+LLQ+FYETTLEAL
Sbjct: 77 FKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL 136
Query: 181 KDAKNDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYA 360
KDAKNDRLWFKTNTKLGKLY +R ++ KL KIL+QLHQSCQTD+GEDDLKKGTQLLEIYA
Sbjct: 137 KDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYA 196
Query: 361 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGV 471
LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGV
Sbjct: 197 LEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGV 233
>AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit 9
protein.
Length = 422
Score = 39.1 bits (87), Expect = 0.011
Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Frame = +1
Query: 19 TEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQ-DFYETTLEALKDAKN 195
T A LL Y++ + K+ + + +ME E LE+++ AK+
Sbjct: 60 TGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLESIEWAKS 119
Query: 196 DRLWF---KTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALE 366
++ F +L LY+D + + + QL + + + + L+E+ LE
Sbjct: 120 EKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDK------ALLVEVQLLE 173
Query: 367 IQMYTAQKNNKKLKALYEQSLHIKSAIP-HPLIMGVIRECGGKMHL-REGEFEKAHTDFF 540
+ Y A N K +A + +AI P + + G +H E +++ A++ F+
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFY 233
Query: 541 EAFKNYD 561
EAF+ YD
Sbjct: 234 EAFEGYD 240
>BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 38.7 bits (86), Expect = 0.014
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Frame = +1
Query: 19 TEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQ-DFYETTLEALKDAKN 195
T A LL Y++ + K+ + + +ME E LE ++ AK+
Sbjct: 60 TGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKS 119
Query: 196 DRLWF---KTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALE 366
++ F +L LY+D + + + QL + + + + L+E+ LE
Sbjct: 120 EKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDK------ALLVEVQLLE 173
Query: 367 IQMYTAQKNNKKLKALYEQSLHIKSAIP-HPLIMGVIRECGGKMHL-REGEFEKAHTDFF 540
+ Y A N K +A + +AI P + + G +H E +++ A++ F+
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFY 233
Query: 541 EAFKNYD 561
EAF+ YD
Sbjct: 234 EAFEGYD 240
>BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 38.7 bits (86), Expect = 0.014
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Frame = +1
Query: 19 TEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQ-DFYETTLEALKDAKN 195
T A LL Y++ + K+ + + +ME E LE ++ AK+
Sbjct: 60 TGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKS 119
Query: 196 DRLWF---KTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALE 366
++ F +L LY+D + + + QL + + + + L+E+ LE
Sbjct: 120 EKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDK------ALLVEVQLLE 173
Query: 367 IQMYTAQKNNKKLKALYEQSLHIKSAIP-HPLIMGVIRECGGKMHL-REGEFEKAHTDFF 540
+ Y A N K +A + +AI P + + G +H E +++ A++ F+
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFY 233
Query: 541 EAFKNYD 561
EAF+ YD
Sbjct: 234 EAFEGYD 240
>AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPase
subunit 11 variant protein.
Length = 423
Score = 38.7 bits (86), Expect = 0.014
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Frame = +1
Query: 19 TEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQ-DFYETTLEALKDAKN 195
T A LL Y++ + K+ + + +ME E LE ++ AK+
Sbjct: 60 TGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKS 119
Query: 196 DRLWF---KTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALE 366
++ F +L LY+D + + + QL + + + + L+E+ LE
Sbjct: 120 EKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDK------ALLVEVQLLE 173
Query: 367 IQMYTAQKNNKKLKALYEQSLHIKSAIP-HPLIMGVIRECGGKMHL-REGEFEKAHTDFF 540
+ Y A N K +A + +AI P + + G +H E +++ A++ F+
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFY 233
Query: 541 EAFKNYD 561
EAF+ YD
Sbjct: 234 EAFEGYD 240
>AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit
p44.5 protein.
Length = 422
Score = 38.7 bits (86), Expect = 0.014
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Frame = +1
Query: 19 TEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSRNMELLQ-DFYETTLEALKDAKN 195
T A LL Y++ + K+ + + +ME E LE ++ AK+
Sbjct: 60 TGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKS 119
Query: 196 DRLWF---KTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALE 366
++ F +L LY+D + + + QL + + + + L+E+ LE
Sbjct: 120 EKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDK------ALLVEVQLLE 173
Query: 367 IQMYTAQKNNKKLKALYEQSLHIKSAIP-HPLIMGVIRECGGKMHL-REGEFEKAHTDFF 540
+ Y A N K +A + +AI P + + G +H E +++ A++ F+
Sbjct: 174 SKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFY 233
Query: 541 EAFKNYD 561
EAF+ YD
Sbjct: 234 EAFEGYD 240
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 37.9 bits (84), Expect = 0.024
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Frame = +1
Query: 166 TLEALKDAK--NDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGT 339
TL+ LK K + + F T+T L + D+N L K D +DL T
Sbjct: 300 TLDILKHGKRFHATVSFDTDTGLKQALETVNDYNPLMK-----------DFPLNDLLSAT 348
Query: 340 QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGK--MHLREGE 513
+L +I + ++T + + K +++L + AI L +++ G + MH+ E
Sbjct: 349 ELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKVLGTRKLMHVAYEE 408
Query: 514 FEKAHTDFFEAFKNYDE 564
FEK FE F+ +D+
Sbjct: 409 FEKVMVACFEVFQTWDD 425
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 37.9 bits (84), Expect = 0.024
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Frame = +1
Query: 166 TLEALKDAK--NDRLWFKTNTKLGKLYYDRGDFNKLAKILKQLHQSCQTDEGEDDLKKGT 339
TL+ LK K + + F T+T L + D+N L K D +DL T
Sbjct: 312 TLDILKHGKRFHATVSFDTDTGLKQALETVNDYNPLMK-----------DFPLNDLLSAT 360
Query: 340 QLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGK--MHLREGE 513
+L +I + ++T + + K +++L + AI L +++ G + MH+ E
Sbjct: 361 ELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKVLGTRKLMHVAYEE 420
Query: 514 FEKAHTDFFEAFKNYDE 564
FEK FE F+ +D+
Sbjct: 421 FEKVMVACFEVFQTWDD 437
>BC111750-1|AAI11751.1| 1025|Homo sapiens interferon induced with
helicase C domain 1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 298 CQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYE 420
C DE EDDLKK +L E + ++ +NNK LK L E
Sbjct: 654 CDGDEDEDDLKKPLKLDETDRFLMTLFF--ENNKMLKRLAE 692
>BC078180-1|AAH78180.1| 772|Homo sapiens IFIH1 protein protein.
Length = 772
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 298 CQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYE 420
C DE EDDLKK +L E + ++ +NNK LK L E
Sbjct: 654 CDGDEDEDDLKKPLKLDETDRFLMTLFF--ENNKMLKRLAE 692
>AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box
protein RH116 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 298 CQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYE 420
C DE EDDLKK +L E + ++ +NNK LK L E
Sbjct: 654 CDGDEDEDDLKKPLKLDETDRFLMTLFF--ENNKMLKRLAE 692
>AK056293-1|BAB71141.1| 468|Homo sapiens protein ( Homo sapiens
cDNA FLJ31731 fis, clone NT2RI2006855, weakly similar to
Homo sapiens RNA helicase (RIG-I) mRNA. ).
Length = 468
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 298 CQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYE 420
C DE EDDLKK +L E + ++ +NNK LK L E
Sbjct: 97 CDGDEDEDDLKKPLKLDETDRFLMTLFF--ENNKMLKRLAE 135
>AF095844-1|AAG34368.1| 1025|Homo sapiens melanoma differentiation
associated protein-5 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 298 CQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYE 420
C DE EDDLKK +L E + ++ +NNK LK L E
Sbjct: 654 CDGDEDEDDLKKPLKLDETDRFLMTLFF--ENNKMLKRLAE 692
>AC007750-3|AAY24206.1| 589|Homo sapiens unknown protein.
Length = 589
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 298 CQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYE 420
C DE EDDLKK +L E + ++ +NNK LK L E
Sbjct: 218 CDGDEDEDDLKKPLKLDETDRFLMTLFF--ENNKMLKRLAE 256
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.133 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,587,871
Number of Sequences: 237096
Number of extensions: 1209216
Number of successful extensions: 2998
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2996
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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