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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0234
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.11 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   5.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = -1

Query: 527  DTGSQCRSVTCTSGATQTASWWCMEATMDWYTEADT-GTVMTPDTDT 390
            DTG+           T+ ++WW    T  W+T   T  T  T  T T
Sbjct: 1022 DTGASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTT 1068



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 31   IVINCYKYHGRED 69
            I + CY YHG+ D
Sbjct: 2010 IAVMCYDYHGQWD 2022



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 73  LPAFTEEDEKGPPTQPMSQYAPA 141
           LP     +++ PP +P+  Y P+
Sbjct: 80  LPLRDAVEKRPPPDEPIDDYEPS 102


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 482 WRRSCRSRCDTDYQCHYVKDYIYRYNVV*TVVLITE 589
           +R SCR        CH +K ++ RY     VVL  E
Sbjct: 285 YRYSCRDCSYATKYCHSLKIHLRRYGHTPNVVLDEE 320


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 394 SVSGVITVPVSASVYQSMVASMHHHEAVCVA 486
           S S   T P +A +Y  + A+ HHH+A   A
Sbjct: 48  SSSSASTSP-AARMYPYVSAAHHHHQAAAAA 77


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 394 SVSGVITVPVSASVYQSMVASMHHHEAVCVA 486
           S S   T P +A +Y  + A+ HHH+A   A
Sbjct: 48  SSSSASTSP-AARMYPYVSAAHHHHQAAAAA 77


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 196 PNNPIITLPDGT-TAHVIQSGEGGASVVGALDTDGA 300
           PNNP I + DGT T + IQ    G  +  A++  G+
Sbjct: 748 PNNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGS 783


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = -3

Query: 309 HGDGAVRVQRPHHAGSAFAGLDHVRGG---PVGQRD-DGVVG 196
           H         P+HA       +HV GG    VG+RD D + G
Sbjct: 41  HSPHLNHAMHPYHANHVNPTANHVMGGAVPDVGKRDKDAIYG 82


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 151 TITNPDGSVSLIQVDPNNP 207
           T+T PDG  ++I+    NP
Sbjct: 579 TVTVPDGGFTIIRFKATNP 597


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 482 WRRSCRSRCDTDYQCHYVKDYIYRY 556
           +R SCR        CH +K ++ RY
Sbjct: 43  YRYSCRDCSYATKYCHSLKIHLRRY 67


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -3

Query: 225 VGQRDDGVVGVHLDE 181
           VG RDDGVV V LD+
Sbjct: 58  VGLRDDGVVSV-LDD 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,311
Number of Sequences: 336
Number of extensions: 2354
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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