Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0233
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 576 ELTLHYDLPADLIQHSVLEKFLGKIIIGK-QDP 671
           +LT H  L +D +     E+F G++ +   QDP
Sbjct: 277 DLTTHVMLLSDWMHEDATERFPGRLAVNTGQDP 309


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 576 ELTLHYDLPADLIQHSVLEKFLGKIIIGK-QDP 671
           +LT H  L +D +     E+F G++ +   QDP
Sbjct: 277 DLTTHVMLLSDWMHEDATERFPGRLAVNTGQDP 309


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = -3

Query: 621 YAGSNLLVNHNARLIPQQICSLEAVTFRLLLWQFF 517
           + GS L+++    ++   + +   +TF   +W+FF
Sbjct: 381 HIGSQLVLHTVKTVLKTTMSTFSDITFMRTVWKFF 415


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 4   YSKRKIVDTIPYFESIILVRSISIE 78
           YSK  IV T+ YF   I++  +  E
Sbjct: 34  YSKIGIVQTVAYFVIFIILTIVFFE 58


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 70  RYYVLVLCFQNMELCRLFF 14
           +YY L +C  N+ +  +FF
Sbjct: 54  KYYWLNVCCLNLSIVTIFF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,738
Number of Sequences: 336
Number of extensions: 3455
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)