Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0233
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051887-1|AAK93311.1|  782|Drosophila melanogaster LD37409p pro...   200   1e-51
AE014297-545|AAF54073.1|  782|Drosophila melanogaster CG1104-PA,...   200   1e-51
AE014297-546|AAN13356.1|  739|Drosophila melanogaster CG1104-PB,...   134   1e-31
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro...    29   4.4  
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P...    29   4.4  

>AY051887-1|AAK93311.1|  782|Drosophila melanogaster LD37409p
           protein.
          Length = 782

 Score =  200 bits (488), Expect = 1e-51
 Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = +3

Query: 165 TDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQL 344
           +DWDEIKRLAADFQKAQL++T Q+LSERNC+EIVT L+E ++++V+FTNDGKEY+T   L
Sbjct: 3   SDWDEIKRLAADFQKAQLTSTLQKLSERNCVEIVTLLLEKQMLEVVFTNDGKEYITPDHL 62

Query: 345 IKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEI-VKGKDVQLISGYLITNYYLEK 521
            +E++DELYV+GGR N V+++K LNVD + I      I  + + V L+ G LI   Y+  
Sbjct: 63  EREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAENQSVHLVLGQLIDEDYISH 122

Query: 522 IAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEKFLGKIIIGKQDPS 674
           IA+E+NEKL  +G +S+ EL   +DLP+D +QH V+EK LGKII G+QD S
Sbjct: 123 IAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLGKIIKGRQDAS 173


>AE014297-545|AAF54073.1|  782|Drosophila melanogaster CG1104-PA,
           isoform A protein.
          Length = 782

 Score =  200 bits (488), Expect = 1e-51
 Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = +3

Query: 165 TDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQL 344
           +DWDEIKRLAADFQKAQL++T Q+LSERNC+EIVT L+E ++++V+FTNDGKEY+T   L
Sbjct: 3   SDWDEIKRLAADFQKAQLTSTLQKLSERNCVEIVTLLLEKQMLEVVFTNDGKEYITPDHL 62

Query: 345 IKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEI-VKGKDVQLISGYLITNYYLEK 521
            +E++DELYV+GGR N V+++K LNVD + I      I  + + V L+ G LI   Y+  
Sbjct: 63  EREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAENQSVHLVLGQLIDEDYISH 122

Query: 522 IAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEKFLGKIIIGKQDPS 674
           IA+E+NEKL  +G +S+ EL   +DLP+D +QH V+EK LGKII G+QD S
Sbjct: 123 IAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLGKIIKGRQDAS 173


>AE014297-546|AAN13356.1|  739|Drosophila melanogaster CG1104-PB,
           isoform B protein.
          Length = 739

 Score =  134 bits (323), Expect = 1e-31
 Identities = 64/130 (49%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
 Frame = +3

Query: 288 LIDVIFTNDGKEYLTSLQLIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEI-VK 464
           +++V+FTNDGKEY+T   L +E++DELYV+GGR N V+++K LNVD + I      I  +
Sbjct: 1   MLEVVFTNDGKEYITPDHLEREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAE 60

Query: 465 GKDVQLISGYLITNYYLEKIAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEKFLG 644
            + V L+ G LI   Y+  IA+E+NEKL  +G +S+ EL   +DLP+D +QH V+EK LG
Sbjct: 61  NQSVHLVLGQLIDEDYISHIAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLG 120

Query: 645 KIIIGKQDPS 674
           KII G+QD S
Sbjct: 121 KIIKGRQDAS 130


>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
          Length = 1654

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = -2

Query: 457  ISGMCVV--MWLKSTFNSLAKSTVFIRPPCTYNSSFISFISWSEVRYSLPSFVKITSI-N 287
            I  +C +  +W   T   L ++++F+RP  TY+ +   F+     + SL   + +  +  
Sbjct: 939  IPSICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQG 998

Query: 286  LSSINFVTISIQFRSDNL 233
            +  +  +   I+ R +NL
Sbjct: 999  MCYVMNIKDYIKMRPENL 1016


>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
            protein.
          Length = 1654

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = -2

Query: 457  ISGMCVV--MWLKSTFNSLAKSTVFIRPPCTYNSSFISFISWSEVRYSLPSFVKITSI-N 287
            I  +C +  +W   T   L ++++F+RP  TY+ +   F+     + SL   + +  +  
Sbjct: 939  IPSICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQG 998

Query: 286  LSSINFVTISIQFRSDNL 233
            +  +  +   I+ R +NL
Sbjct: 999  MCYVMNIKDYIKMRPENL 1016


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,070,603
Number of Sequences: 53049
Number of extensions: 534157
Number of successful extensions: 1088
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)